Protein–RNA interactions for Protein: Q06507

Atf4, Cyclic AMP-dependent transcription factor ATF-4, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf4Q06507 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Atf4Q06507 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC14.88□□□□□ -0.03
Atf4Q06507 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Atf4Q06507 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Atf4Q06507 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Atf4Q06507 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Atf4Q06507 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Atf4Q06507 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Atf4Q06507 Gm11841-201ENSMUST00000117060 1963 ntBASIC14.87□□□□□ -0.03
Atf4Q06507 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Atf4Q06507 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Atf4Q06507 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Atf4Q06507 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Atf4Q06507 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Atf4Q06507 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
Atf4Q06507 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Atf4Q06507 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Atf4Q06507 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Atf4Q06507 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Atf4Q06507 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Atf4Q06507 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC14.87□□□□□ -0.03
Atf4Q06507 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Atf4Q06507 Gm13366-201ENSMUST00000122198 970 ntBASIC14.87□□□□□ -0.03
Atf4Q06507 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Atf4Q06507 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Atf4Q06507 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Atf4Q06507 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC14.87□□□□□ -0.03
Atf4Q06507 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Atf4Q06507 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Atf4Q06507 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Atf4Q06507 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Atf4Q06507 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Atf4Q06507 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Atf4Q06507 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Atf4Q06507 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Atf4Q06507 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Atf4Q06507 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.87□□□□□ -0.03
Atf4Q06507 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Atf4Q06507 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Atf4Q06507 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Atf4Q06507 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Atf4Q06507 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Atf4Q06507 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Atf4Q06507 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Atf4Q06507 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Atf4Q06507 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Atf4Q06507 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC14.86□□□□□ -0.03
Atf4Q06507 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Atf4Q06507 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
Atf4Q06507 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Atf4Q06507 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Atf4Q06507 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC14.86□□□□□ -0.03
Atf4Q06507 Auts2-212ENSMUST00000178555 309 ntBASIC14.86□□□□□ -0.03
Atf4Q06507 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC14.86□□□□□ -0.03
Atf4Q06507 Gm18351-201ENSMUST00000188646 883 ntBASIC14.86□□□□□ -0.03
Atf4Q06507 Gm43416-201ENSMUST00000201916 1015 ntBASIC14.86□□□□□ -0.03
Atf4Q06507 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Atf4Q06507 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC14.86□□□□□ -0.03
Atf4Q06507 Gm15590-201ENSMUST00000078419 552 ntBASIC14.86□□□□□ -0.03
Atf4Q06507 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Atf4Q06507 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Atf4Q06507 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Atf4Q06507 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Atf4Q06507 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Atf4Q06507 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Atf4Q06507 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Atf4Q06507 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Atf4Q06507 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Atf4Q06507 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.86□□□□□ -0.03
Atf4Q06507 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Atf4Q06507 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Atf4Q06507 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Atf4Q06507 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Atf4Q06507 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Atf4Q06507 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Atf4Q06507 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Atf4Q06507 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC14.85□□□□□ -0.03
Atf4Q06507 Gm25745-201ENSMUST00000174945 133 ntBASIC14.85□□□□□ -0.03
Atf4Q06507 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Atf4Q06507 Gm37436-201ENSMUST00000193842 1085 ntBASIC14.85□□□□□ -0.03
Atf4Q06507 AC127349.1-201ENSMUST00000224590 266 ntBASIC14.85□□□□□ -0.03
Atf4Q06507 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Atf4Q06507 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Atf4Q06507 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Atf4Q06507 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Atf4Q06507 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Atf4Q06507 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Atf4Q06507 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Atf4Q06507 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Atf4Q06507 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Atf4Q06507 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Atf4Q06507 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Atf4Q06507 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Atf4Q06507 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Atf4Q06507 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Atf4Q06507 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Atf4Q06507 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
Atf4Q06507 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Atf4Q06507 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Atf4Q06507 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms