Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nkx3-2P97503 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
Nkx3-2P97503 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nkx3-2P97503 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx3-2P97503 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx3-2P97503 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx3-2P97503 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Nkx3-2P97503 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx3-2P97503 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx3-2P97503 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx3-2P97503 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC14.76□□□□□ -0.05
Nkx3-2P97503 Gm18206-201ENSMUST00000207027 926 ntBASIC14.76□□□□□ -0.05
Nkx3-2P97503 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx3-2P97503 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx3-2P97503 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx3-2P97503 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx3-2P97503 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx3-2P97503 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Nkx3-2P97503 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Nkx3-2P97503 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx3-2P97503 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx3-2P97503 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx3-2P97503 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx3-2P97503 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx3-2P97503 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx3-2P97503 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC14.75□□□□□ -0.05
Nkx3-2P97503 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Nkx3-2P97503 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx3-2P97503 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC14.75□□□□□ -0.05
Nkx3-2P97503 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx3-2P97503 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Nkx3-2P97503 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC14.75□□□□□ -0.05
Nkx3-2P97503 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx3-2P97503 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC14.75□□□□□ -0.05
Nkx3-2P97503 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC14.75□□□□□ -0.05
Nkx3-2P97503 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx3-2P97503 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx3-2P97503 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx3-2P97503 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx3-2P97503 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx3-2P97503 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx3-2P97503 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx3-2P97503 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx3-2P97503 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
Nkx3-2P97503 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx3-2P97503 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx3-2P97503 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx3-2P97503 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC14.74□□□□□ -0.05
Nkx3-2P97503 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC14.74□□□□□ -0.05
Nkx3-2P97503 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx3-2P97503 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx3-2P97503 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx3-2P97503 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx3-2P97503 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx3-2P97503 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
Nkx3-2P97503 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx3-2P97503 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx3-2P97503 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx3-2P97503 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC14.74□□□□□ -0.05
Nkx3-2P97503 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC14.74□□□□□ -0.05
Nkx3-2P97503 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC14.74□□□□□ -0.05
Nkx3-2P97503 Gm5712-201ENSMUST00000199748 1043 ntBASIC14.74□□□□□ -0.05
Nkx3-2P97503 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC14.74□□□□□ -0.05
Nkx3-2P97503 AV026068-213ENSMUST00000223675 1171 ntBASIC14.74□□□□□ -0.05
Nkx3-2P97503 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Nkx3-2P97503 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Nkx3-2P97503 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx3-2P97503 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
Nkx3-2P97503 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx3-2P97503 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx3-2P97503 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx3-2P97503 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx3-2P97503 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx3-2P97503 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx3-2P97503 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nkx3-2P97503 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx3-2P97503 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Nkx3-2P97503 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx3-2P97503 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC14.73□□□□□ -0.05
Nkx3-2P97503 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx3-2P97503 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx3-2P97503 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx3-2P97503 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx3-2P97503 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx3-2P97503 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx3-2P97503 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx3-2P97503 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
Nkx3-2P97503 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx3-2P97503 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx3-2P97503 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC14.73□□□□□ -0.05
Nkx3-2P97503 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx3-2P97503 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Nkx3-2P97503 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx3-2P97503 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC14.73□□□□□ -0.05
Nkx3-2P97503 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
Nkx3-2P97503 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx3-2P97503 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx3-2P97503 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.73□□□□□ -0.05
Nkx3-2P97503 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nkx3-2P97503 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms