Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nkx2-3P97334 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nkx2-3P97334 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC19.57■□□□□ 0.72
Nkx2-3P97334 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Nkx2-3P97334 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nkx2-3P97334 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Nkx2-3P97334 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Nkx2-3P97334 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC19.57■□□□□ 0.72
Nkx2-3P97334 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Nkx2-3P97334 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Nkx2-3P97334 AC153526.5-201ENSMUST00000218661 2147 ntBASIC19.57■□□□□ 0.72
Nkx2-3P97334 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nkx2-3P97334 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Nkx2-3P97334 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nkx2-3P97334 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nkx2-3P97334 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC19.56■□□□□ 0.72
Nkx2-3P97334 Gm43072-201ENSMUST00000200283 1671 ntBASIC19.56■□□□□ 0.72
Nkx2-3P97334 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nkx2-3P97334 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nkx2-3P97334 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC19.56■□□□□ 0.72
Nkx2-3P97334 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nkx2-3P97334 Rprl2-201ENSMUST00000157150 290 ntBASIC19.56■□□□□ 0.72
Nkx2-3P97334 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
Nkx2-3P97334 AC140397.2-201ENSMUST00000224213 834 ntBASIC19.56■□□□□ 0.72
Nkx2-3P97334 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nkx2-3P97334 AC126250.1-201ENSMUST00000228343 1768 ntBASIC19.56■□□□□ 0.72
Nkx2-3P97334 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Nkx2-3P97334 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Nkx2-3P97334 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nkx2-3P97334 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nkx2-3P97334 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nkx2-3P97334 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nkx2-3P97334 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC19.55■□□□□ 0.72
Nkx2-3P97334 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Nkx2-3P97334 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nkx2-3P97334 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Nkx2-3P97334 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nkx2-3P97334 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nkx2-3P97334 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nkx2-3P97334 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nkx2-3P97334 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Nkx2-3P97334 Gm13410-201ENSMUST00000117058 1415 ntBASIC19.55■□□□□ 0.72
Nkx2-3P97334 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC19.55■□□□□ 0.72
Nkx2-3P97334 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC19.55■□□□□ 0.72
Nkx2-3P97334 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC19.55■□□□□ 0.72
Nkx2-3P97334 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC19.55■□□□□ 0.72
Nkx2-3P97334 Gm2272-201ENSMUST00000194903 582 ntBASIC19.55■□□□□ 0.72
Nkx2-3P97334 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC19.55■□□□□ 0.72
Nkx2-3P97334 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nkx2-3P97334 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nkx2-3P97334 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nkx2-3P97334 Gm19430-201ENSMUST00000193847 2137 ntBASIC19.55■□□□□ 0.72
Nkx2-3P97334 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nkx2-3P97334 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nkx2-3P97334 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nkx2-3P97334 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Nkx2-3P97334 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nkx2-3P97334 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nkx2-3P97334 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nkx2-3P97334 Fgf17-202ENSMUST00000227123 1336 ntBASIC19.54■□□□□ 0.72
Nkx2-3P97334 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nkx2-3P97334 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nkx2-3P97334 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nkx2-3P97334 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Nkx2-3P97334 Mir449b-201ENSMUST00000104833 80 ntBASIC19.54■□□□□ 0.72
Nkx2-3P97334 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nkx2-3P97334 Gm14057-201ENSMUST00000120631 482 ntBASIC19.54■□□□□ 0.72
Nkx2-3P97334 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Nkx2-3P97334 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC19.54■□□□□ 0.72
Nkx2-3P97334 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nkx2-3P97334 Gm44487-201ENSMUST00000205145 325 ntBASIC19.54■□□□□ 0.72
Nkx2-3P97334 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nkx2-3P97334 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC19.54■□□□□ 0.72
Nkx2-3P97334 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nkx2-3P97334 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nkx2-3P97334 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nkx2-3P97334 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nkx2-3P97334 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Nkx2-3P97334 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Nkx2-3P97334 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
Nkx2-3P97334 Gm45293-201ENSMUST00000209754 1812 ntBASIC19.53■□□□□ 0.72
Nkx2-3P97334 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nkx2-3P97334 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Nkx2-3P97334 Gm26917-202ENSMUST00000192833 3329 ntBASIC19.53■□□□□ 0.72
Nkx2-3P97334 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Nkx2-3P97334 Gm42473-201ENSMUST00000201056 2291 ntBASIC19.53■□□□□ 0.72
Nkx2-3P97334 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC19.53■□□□□ 0.72
Nkx2-3P97334 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC19.53■□□□□ 0.72
Nkx2-3P97334 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Nkx2-3P97334 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Nkx2-3P97334 Gm18057-201ENSMUST00000208220 503 ntBASIC19.53■□□□□ 0.72
Nkx2-3P97334 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Nkx2-3P97334 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nkx2-3P97334 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC19.53■□□□□ 0.72
Nkx2-3P97334 Gm10154-201ENSMUST00000084445 354 ntBASIC19.53■□□□□ 0.72
Nkx2-3P97334 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nkx2-3P97334 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Nkx2-3P97334 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Nkx2-3P97334 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nkx2-3P97334 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms