Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim43cP86449 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim43cP86449 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim43cP86449 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trim43cP86449 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Trim43cP86449 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Trim43cP86449 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC17■□□□□ 0.31
Trim43cP86449 Gm24589-201ENSMUST00000116692 94 ntBASIC17■□□□□ 0.31
Trim43cP86449 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC17■□□□□ 0.31
Trim43cP86449 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC17■□□□□ 0.31
Trim43cP86449 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trim43cP86449 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Trim43cP86449 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC17■□□□□ 0.31
Trim43cP86449 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim43cP86449 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Trim43cP86449 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim43cP86449 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim43cP86449 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trim43cP86449 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Trim43cP86449 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Trim43cP86449 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Trim43cP86449 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim43cP86449 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC17■□□□□ 0.31
Trim43cP86449 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
Trim43cP86449 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim43cP86449 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim43cP86449 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim43cP86449 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim43cP86449 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Trim43cP86449 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trim43cP86449 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Trim43cP86449 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim43cP86449 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim43cP86449 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC16.99■□□□□ 0.31
Trim43cP86449 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC16.99■□□□□ 0.31
Trim43cP86449 Gm27646-201ENSMUST00000183989 110 ntBASIC16.99■□□□□ 0.31
Trim43cP86449 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC16.99■□□□□ 0.31
Trim43cP86449 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trim43cP86449 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trim43cP86449 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Trim43cP86449 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
Trim43cP86449 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim43cP86449 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim43cP86449 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim43cP86449 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim43cP86449 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim43cP86449 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim43cP86449 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim43cP86449 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim43cP86449 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim43cP86449 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.99■□□□□ 0.31
Trim43cP86449 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim43cP86449 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC16.99■□□□□ 0.31
Trim43cP86449 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim43cP86449 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim43cP86449 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim43cP86449 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim43cP86449 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim43cP86449 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim43cP86449 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trim43cP86449 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim43cP86449 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim43cP86449 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim43cP86449 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC16.98■□□□□ 0.31
Trim43cP86449 Gm15358-201ENSMUST00000119249 520 ntBASIC16.98■□□□□ 0.31
Trim43cP86449 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim43cP86449 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC16.98■□□□□ 0.31
Trim43cP86449 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC16.98■□□□□ 0.31
Trim43cP86449 Gm19164-201ENSMUST00000210667 640 ntBASIC16.98■□□□□ 0.31
Trim43cP86449 AC093926.2-201ENSMUST00000214468 1228 ntBASIC16.98■□□□□ 0.31
Trim43cP86449 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC16.98■□□□□ 0.31
Trim43cP86449 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC16.98■□□□□ 0.31
Trim43cP86449 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC16.98■□□□□ 0.31
Trim43cP86449 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim43cP86449 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Trim43cP86449 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim43cP86449 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim43cP86449 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim43cP86449 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim43cP86449 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim43cP86449 BC037039-201ENSMUST00000192003 2205 ntBASIC16.97■□□□□ 0.31
Trim43cP86449 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim43cP86449 Gm42901-201ENSMUST00000197735 3171 ntBASIC16.97■□□□□ 0.31
Trim43cP86449 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim43cP86449 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim43cP86449 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trim43cP86449 Gm14722-201ENSMUST00000118943 689 ntBASIC16.97■□□□□ 0.31
Trim43cP86449 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC16.97■□□□□ 0.31
Trim43cP86449 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
Trim43cP86449 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC16.97■□□□□ 0.31
Trim43cP86449 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Trim43cP86449 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC16.97■□□□□ 0.31
Trim43cP86449 AC158538.2-201ENSMUST00000225455 906 ntBASIC16.97■□□□□ 0.31
Trim43cP86449 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim43cP86449 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim43cP86449 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim43cP86449 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim43cP86449 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trim43cP86449 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim43cP86449 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms