Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SgcaP82350 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SgcaP82350 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC13.13□□□□□ -0.31
SgcaP82350 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SgcaP82350 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC13.13□□□□□ -0.31
SgcaP82350 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SgcaP82350 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SgcaP82350 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SgcaP82350 Gm43509-201ENSMUST00000196551 2594 ntBASIC13.13□□□□□ -0.31
SgcaP82350 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SgcaP82350 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SgcaP82350 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SgcaP82350 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SgcaP82350 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SgcaP82350 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SgcaP82350 Zfp264-201ENSMUST00000208656 1563 ntBASIC13.13□□□□□ -0.31
SgcaP82350 Gm15378-201ENSMUST00000121894 207 ntBASIC13.13□□□□□ -0.31
SgcaP82350 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC13.13□□□□□ -0.31
SgcaP82350 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SgcaP82350 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC13.13□□□□□ -0.31
SgcaP82350 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SgcaP82350 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
SgcaP82350 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SgcaP82350 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
SgcaP82350 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SgcaP82350 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SgcaP82350 AC174678.1-201ENSMUST00000228007 2749 ntBASIC13.13□□□□□ -0.31
SgcaP82350 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SgcaP82350 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SgcaP82350 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SgcaP82350 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SgcaP82350 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC13.13□□□□□ -0.31
SgcaP82350 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
SgcaP82350 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SgcaP82350 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.13□□□□□ -0.31
SgcaP82350 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SgcaP82350 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
SgcaP82350 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
SgcaP82350 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
SgcaP82350 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
SgcaP82350 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SgcaP82350 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SgcaP82350 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SgcaP82350 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SgcaP82350 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
SgcaP82350 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
SgcaP82350 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SgcaP82350 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SgcaP82350 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC13.12□□□□□ -0.31
SgcaP82350 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SgcaP82350 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC13.12□□□□□ -0.31
SgcaP82350 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC13.12□□□□□ -0.31
SgcaP82350 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SgcaP82350 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SgcaP82350 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC13.12□□□□□ -0.31
SgcaP82350 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
SgcaP82350 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SgcaP82350 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
SgcaP82350 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
SgcaP82350 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SgcaP82350 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SgcaP82350 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SgcaP82350 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SgcaP82350 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SgcaP82350 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
SgcaP82350 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SgcaP82350 Gm38327-201ENSMUST00000195852 1755 ntBASIC13.12□□□□□ -0.31
SgcaP82350 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SgcaP82350 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
SgcaP82350 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SgcaP82350 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SgcaP82350 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
SgcaP82350 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SgcaP82350 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
SgcaP82350 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SgcaP82350 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SgcaP82350 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
SgcaP82350 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SgcaP82350 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SgcaP82350 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SgcaP82350 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SgcaP82350 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
SgcaP82350 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SgcaP82350 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC13.11□□□□□ -0.31
SgcaP82350 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC13.11□□□□□ -0.31
SgcaP82350 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SgcaP82350 Gm45133-201ENSMUST00000207548 2773 ntBASIC13.11□□□□□ -0.31
SgcaP82350 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
SgcaP82350 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
SgcaP82350 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SgcaP82350 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
SgcaP82350 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC13.11□□□□□ -0.31
SgcaP82350 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SgcaP82350 Gm11960-202ENSMUST00000181063 2858 ntBASIC13.1□□□□□ -0.31
SgcaP82350 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SgcaP82350 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SgcaP82350 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
SgcaP82350 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SgcaP82350 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SgcaP82350 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms