Protein–RNA interactions for Protein: P70339

Frat1, Proto-oncogene FRAT1, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Frat1P70339 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Frat1P70339 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Frat1P70339 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Frat1P70339 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Frat1P70339 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Frat1P70339 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Frat1P70339 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Frat1P70339 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Frat1P70339 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Frat1P70339 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Frat1P70339 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Frat1P70339 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Frat1P70339 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Frat1P70339 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Frat1P70339 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Frat1P70339 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC17.02■□□□□ 0.32
Frat1P70339 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Frat1P70339 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Frat1P70339 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Frat1P70339 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Frat1P70339 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Frat1P70339 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
Frat1P70339 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Frat1P70339 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.02■□□□□ 0.32
Frat1P70339 Gm20049-201ENSMUST00000219950 730 ntBASIC17.02■□□□□ 0.32
Frat1P70339 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Frat1P70339 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Frat1P70339 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Frat1P70339 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Frat1P70339 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Frat1P70339 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Frat1P70339 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Frat1P70339 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Frat1P70339 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC17.01■□□□□ 0.31
Frat1P70339 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Frat1P70339 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Frat1P70339 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Frat1P70339 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Frat1P70339 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Frat1P70339 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Frat1P70339 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.01■□□□□ 0.31
Frat1P70339 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.01■□□□□ 0.31
Frat1P70339 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.01■□□□□ 0.31
Frat1P70339 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Frat1P70339 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Frat1P70339 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Frat1P70339 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Frat1P70339 Ap5m1-205ENSMUST00000227431 3757 ntBASIC17.01■□□□□ 0.31
Frat1P70339 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Frat1P70339 AC159649.2-201ENSMUST00000222984 3223 ntBASIC17.01■□□□□ 0.31
Frat1P70339 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Frat1P70339 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Frat1P70339 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Frat1P70339 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Frat1P70339 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Frat1P70339 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Frat1P70339 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Frat1P70339 Gm44443-201ENSMUST00000204396 5633 ntBASIC17■□□□□ 0.31
Frat1P70339 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Frat1P70339 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Frat1P70339 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17■□□□□ 0.31
Frat1P70339 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17■□□□□ 0.31
Frat1P70339 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC17■□□□□ 0.31
Frat1P70339 Gm37179-201ENSMUST00000194862 823 ntBASIC17■□□□□ 0.31
Frat1P70339 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17■□□□□ 0.31
Frat1P70339 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Frat1P70339 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Frat1P70339 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Frat1P70339 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Frat1P70339 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Frat1P70339 Gm37297-201ENSMUST00000192974 2384 ntBASIC17■□□□□ 0.31
Frat1P70339 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC17■□□□□ 0.31
Frat1P70339 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Frat1P70339 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Frat1P70339 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Frat1P70339 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Frat1P70339 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Frat1P70339 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Frat1P70339 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Frat1P70339 Gm45546-201ENSMUST00000211053 2394 ntBASIC16.99■□□□□ 0.31
Frat1P70339 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Frat1P70339 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Frat1P70339 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Frat1P70339 Gm10698-201ENSMUST00000182663 604 ntBASIC16.99■□□□□ 0.31
Frat1P70339 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC16.99■□□□□ 0.31
Frat1P70339 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Frat1P70339 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Frat1P70339 AC132265.1-201ENSMUST00000219233 1665 ntBASIC16.99■□□□□ 0.31
Frat1P70339 Camk2g-217ENSMUST00000226630 1937 ntBASIC16.99■□□□□ 0.31
Frat1P70339 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Frat1P70339 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Frat1P70339 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Frat1P70339 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Frat1P70339 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Frat1P70339 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.99■□□□□ 0.31
Frat1P70339 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Frat1P70339 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Frat1P70339 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Frat1P70339 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Frat1P70339 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms