Protein–RNA interactions for Protein: P70279

Surf6, Surfeit locus protein 6, mousemouse

Known RBP Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Surf6P70279 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC16.29■□□□□ 0.2
Surf6P70279 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Surf6P70279 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Surf6P70279 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Surf6P70279 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Surf6P70279 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Surf6P70279 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Surf6P70279 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Surf6P70279 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Surf6P70279 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
Surf6P70279 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Surf6P70279 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Surf6P70279 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Surf6P70279 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Surf6P70279 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Surf6P70279 Krtap5-1-202ENSMUST00000188274 742 ntBASIC16.28■□□□□ 0.2
Surf6P70279 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC16.28■□□□□ 0.2
Surf6P70279 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Surf6P70279 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Surf6P70279 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Surf6P70279 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Surf6P70279 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Surf6P70279 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Surf6P70279 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Surf6P70279 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Surf6P70279 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Surf6P70279 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Surf6P70279 Gm44291-201ENSMUST00000203102 2865 ntBASIC16.28■□□□□ 0.2
Surf6P70279 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Surf6P70279 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Surf6P70279 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Surf6P70279 AC124581.1-201ENSMUST00000225416 1399 ntBASIC16.27■□□□□ 0.2
Surf6P70279 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Surf6P70279 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Surf6P70279 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Surf6P70279 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Surf6P70279 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Surf6P70279 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC16.27■□□□□ 0.2
Surf6P70279 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.27■□□□□ 0.2
Surf6P70279 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Surf6P70279 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC16.27■□□□□ 0.2
Surf6P70279 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Surf6P70279 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Surf6P70279 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.27■□□□□ 0.2
Surf6P70279 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Surf6P70279 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Surf6P70279 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Surf6P70279 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Surf6P70279 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Surf6P70279 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Surf6P70279 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Surf6P70279 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Surf6P70279 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Surf6P70279 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Surf6P70279 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Surf6P70279 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Surf6P70279 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Surf6P70279 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Surf6P70279 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Surf6P70279 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Surf6P70279 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Surf6P70279 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC16.26■□□□□ 0.19
Surf6P70279 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Surf6P70279 Gm12134-201ENSMUST00000122109 520 ntBASIC16.26■□□□□ 0.19
Surf6P70279 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC16.26■□□□□ 0.19
Surf6P70279 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Surf6P70279 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Surf6P70279 Gm43183-201ENSMUST00000200632 547 ntBASIC16.26■□□□□ 0.19
Surf6P70279 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.26■□□□□ 0.19
Surf6P70279 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Surf6P70279 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Surf6P70279 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Surf6P70279 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Surf6P70279 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Surf6P70279 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Surf6P70279 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Surf6P70279 Gm10710-201ENSMUST00000047876 3971 ntBASIC16.26■□□□□ 0.19
Surf6P70279 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Surf6P70279 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Surf6P70279 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Surf6P70279 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Surf6P70279 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Surf6P70279 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Surf6P70279 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Surf6P70279 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC16.25■□□□□ 0.19
Surf6P70279 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Surf6P70279 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Surf6P70279 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Surf6P70279 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Surf6P70279 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
Surf6P70279 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Surf6P70279 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Surf6P70279 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC16.25■□□□□ 0.19
Surf6P70279 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Surf6P70279 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC16.25■□□□□ 0.19
Surf6P70279 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Surf6P70279 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Surf6P70279 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Surf6P70279 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Surf6P70279 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms