Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Hmgb1P63158 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hmgb1P63158 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hmgb1P63158 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hmgb1P63158 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hmgb1P63158 Rprl3-201ENSMUST00000157400 290 ntBASIC17.2■□□□□ 0.34
Hmgb1P63158 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC17.2■□□□□ 0.34
Hmgb1P63158 AC127302.2-201ENSMUST00000215212 268 ntBASIC17.2■□□□□ 0.34
Hmgb1P63158 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hmgb1P63158 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hmgb1P63158 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hmgb1P63158 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Hmgb1P63158 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hmgb1P63158 Gm45212-201ENSMUST00000205831 3403 ntBASIC17.2■□□□□ 0.34
Hmgb1P63158 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Hmgb1P63158 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hmgb1P63158 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hmgb1P63158 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hmgb1P63158 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hmgb1P63158 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hmgb1P63158 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC17.2■□□□□ 0.34
Hmgb1P63158 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hmgb1P63158 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hmgb1P63158 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgb1P63158 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgb1P63158 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC17.19■□□□□ 0.34
Hmgb1P63158 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgb1P63158 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgb1P63158 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgb1P63158 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgb1P63158 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgb1P63158 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgb1P63158 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
Hmgb1P63158 Gm7669-201ENSMUST00000210184 1603 ntBASIC17.19■□□□□ 0.34
Hmgb1P63158 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC17.19■□□□□ 0.34
Hmgb1P63158 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgb1P63158 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC17.19■□□□□ 0.34
Hmgb1P63158 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgb1P63158 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgb1P63158 Gm8349-201ENSMUST00000182720 1003 ntBASIC17.19■□□□□ 0.34
Hmgb1P63158 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Hmgb1P63158 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgb1P63158 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgb1P63158 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgb1P63158 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgb1P63158 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hmgb1P63158 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC17.19■□□□□ 0.34
Hmgb1P63158 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hmgb1P63158 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Hmgb1P63158 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Hmgb1P63158 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hmgb1P63158 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC17.18■□□□□ 0.34
Hmgb1P63158 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hmgb1P63158 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Hmgb1P63158 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hmgb1P63158 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
Hmgb1P63158 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hmgb1P63158 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC17.18■□□□□ 0.34
Hmgb1P63158 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC17.18■□□□□ 0.34
Hmgb1P63158 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Hmgb1P63158 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hmgb1P63158 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Hmgb1P63158 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hmgb1P63158 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hmgb1P63158 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hmgb1P63158 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hmgb1P63158 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hmgb1P63158 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Hmgb1P63158 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Hmgb1P63158 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hmgb1P63158 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Hmgb1P63158 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC17.17■□□□□ 0.34
Hmgb1P63158 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hmgb1P63158 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hmgb1P63158 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Hmgb1P63158 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hmgb1P63158 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hmgb1P63158 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hmgb1P63158 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hmgb1P63158 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hmgb1P63158 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
Hmgb1P63158 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC17.17■□□□□ 0.34
Hmgb1P63158 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hmgb1P63158 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hmgb1P63158 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hmgb1P63158 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
Hmgb1P63158 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC17.17■□□□□ 0.34
Hmgb1P63158 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hmgb1P63158 Gm9867-201ENSMUST00000192212 2647 ntBASIC17.17■□□□□ 0.34
Hmgb1P63158 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hmgb1P63158 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Hmgb1P63158 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hmgb1P63158 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
Hmgb1P63158 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Hmgb1P63158 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC17.17■□□□□ 0.34
Hmgb1P63158 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC17.17■□□□□ 0.34
Hmgb1P63158 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hmgb1P63158 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hmgb1P63158 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC17.17■□□□□ 0.34
Hmgb1P63158 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms