Protein–RNA interactions for Protein: P62962

Pfn1, Profilin-1, mousemouse

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfn1P62962 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pfn1P62962 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pfn1P62962 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Pfn1P62962 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC12.17□□□□□ -0.46
Pfn1P62962 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pfn1P62962 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pfn1P62962 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pfn1P62962 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pfn1P62962 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pfn1P62962 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pfn1P62962 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Pfn1P62962 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pfn1P62962 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pfn1P62962 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pfn1P62962 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Pfn1P62962 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pfn1P62962 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Pfn1P62962 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pfn1P62962 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Pfn1P62962 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Pfn1P62962 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Pfn1P62962 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pfn1P62962 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pfn1P62962 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pfn1P62962 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pfn1P62962 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pfn1P62962 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pfn1P62962 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Pfn1P62962 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pfn1P62962 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pfn1P62962 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pfn1P62962 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pfn1P62962 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Pfn1P62962 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pfn1P62962 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pfn1P62962 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Pfn1P62962 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Pfn1P62962 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pfn1P62962 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pfn1P62962 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pfn1P62962 Gm7712-202ENSMUST00000222331 1510 ntBASIC12.16□□□□□ -0.46
Pfn1P62962 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pfn1P62962 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC12.16□□□□□ -0.46
Pfn1P62962 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pfn1P62962 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pfn1P62962 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pfn1P62962 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC12.16□□□□□ -0.46
Pfn1P62962 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pfn1P62962 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC12.16□□□□□ -0.46
Pfn1P62962 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Pfn1P62962 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pfn1P62962 Gm5643-201ENSMUST00000117081 966 ntBASIC12.16□□□□□ -0.46
Pfn1P62962 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC12.16□□□□□ -0.46
Pfn1P62962 Gm44878-201ENSMUST00000205812 1295 ntBASIC12.16□□□□□ -0.46
Pfn1P62962 Slc35b2-207ENSMUST00000226086 850 ntBASIC12.16□□□□□ -0.46
Pfn1P62962 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pfn1P62962 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pfn1P62962 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pfn1P62962 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pfn1P62962 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Pfn1P62962 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pfn1P62962 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC12.16□□□□□ -0.46
Pfn1P62962 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pfn1P62962 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pfn1P62962 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pfn1P62962 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC12.16□□□□□ -0.46
Pfn1P62962 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pfn1P62962 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pfn1P62962 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pfn1P62962 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Pfn1P62962 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC12.16□□□□□ -0.46
Pfn1P62962 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pfn1P62962 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pfn1P62962 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pfn1P62962 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pfn1P62962 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pfn1P62962 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pfn1P62962 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pfn1P62962 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pfn1P62962 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pfn1P62962 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pfn1P62962 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC12.15□□□□□ -0.46
Pfn1P62962 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pfn1P62962 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pfn1P62962 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pfn1P62962 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pfn1P62962 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pfn1P62962 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pfn1P62962 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pfn1P62962 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pfn1P62962 Gm10605-202ENSMUST00000183019 3198 ntBASIC12.15□□□□□ -0.46
Pfn1P62962 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pfn1P62962 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Pfn1P62962 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pfn1P62962 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Pfn1P62962 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Pfn1P62962 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Pfn1P62962 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Pfn1P62962 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.47
Pfn1P62962 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms