Protein–RNA interactions for Protein: P62812

Gabra1, Gamma-aminobutyric acid receptor subunit alpha-1, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabra1P62812 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Gabra1P62812 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Gabra1P62812 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Gabra1P62812 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Gabra1P62812 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Gabra1P62812 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Gabra1P62812 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Gabra1P62812 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Gabra1P62812 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Gabra1P62812 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Gabra1P62812 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gabra1P62812 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gabra1P62812 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC13.2□□□□□ -0.3
Gabra1P62812 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gabra1P62812 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gabra1P62812 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gabra1P62812 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC13.2□□□□□ -0.3
Gabra1P62812 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gabra1P62812 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gabra1P62812 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gabra1P62812 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gabra1P62812 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gabra1P62812 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Gabra1P62812 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gabra1P62812 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Gabra1P62812 Gm13186-201ENSMUST00000118031 316 ntBASIC13.2□□□□□ -0.3
Gabra1P62812 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC13.2□□□□□ -0.3
Gabra1P62812 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gabra1P62812 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gabra1P62812 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gabra1P62812 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Gabra1P62812 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Gabra1P62812 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Gabra1P62812 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Gabra1P62812 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC13.2□□□□□ -0.3
Gabra1P62812 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gabra1P62812 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Gabra1P62812 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Gabra1P62812 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gabra1P62812 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gabra1P62812 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gabra1P62812 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Gabra1P62812 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gabra1P62812 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gabra1P62812 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gabra1P62812 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gabra1P62812 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Gabra1P62812 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Gabra1P62812 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gabra1P62812 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Gabra1P62812 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.19□□□□□ -0.3
Gabra1P62812 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gabra1P62812 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC13.19□□□□□ -0.3
Gabra1P62812 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gabra1P62812 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC13.19□□□□□ -0.3
Gabra1P62812 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gabra1P62812 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Gabra1P62812 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gabra1P62812 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Gabra1P62812 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gabra1P62812 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.19□□□□□ -0.3
Gabra1P62812 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Gabra1P62812 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gabra1P62812 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gabra1P62812 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gabra1P62812 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gabra1P62812 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gabra1P62812 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gabra1P62812 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Gabra1P62812 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gabra1P62812 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC13.18□□□□□ -0.3
Gabra1P62812 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Gabra1P62812 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Gabra1P62812 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Gabra1P62812 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gabra1P62812 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Gabra1P62812 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Gabra1P62812 Slc35b2-202ENSMUST00000223987 1766 ntBASIC13.18□□□□□ -0.3
Gabra1P62812 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Gabra1P62812 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gabra1P62812 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gabra1P62812 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gabra1P62812 Gm36967-201ENSMUST00000193814 266 ntBASIC13.18□□□□□ -0.3
Gabra1P62812 Gm7791-201ENSMUST00000219066 539 ntBASIC13.18□□□□□ -0.3
Gabra1P62812 Gm20049-201ENSMUST00000219950 730 ntBASIC13.18□□□□□ -0.3
Gabra1P62812 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gabra1P62812 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gabra1P62812 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Gabra1P62812 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Gabra1P62812 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Gabra1P62812 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Gabra1P62812 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Gabra1P62812 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gabra1P62812 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gabra1P62812 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gabra1P62812 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gabra1P62812 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Gabra1P62812 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gabra1P62812 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Gabra1P62812 Gm7712-202ENSMUST00000222331 1510 ntBASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms