Protein–RNA interactions for Protein: P62322

Lsm5, U6 snRNA-associated Sm-like protein LSm5, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm5P62322 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lsm5P62322 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lsm5P62322 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Lsm5P62322 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.08□□□□□ -0.32
Lsm5P62322 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lsm5P62322 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lsm5P62322 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lsm5P62322 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lsm5P62322 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lsm5P62322 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Lsm5P62322 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC13.07□□□□□ -0.32
Lsm5P62322 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Lsm5P62322 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm5P62322 Zfp264-201ENSMUST00000208656 1563 ntBASIC13.07□□□□□ -0.32
Lsm5P62322 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Lsm5P62322 Nrn1-203ENSMUST00000223611 1443 ntBASIC13.07□□□□□ -0.32
Lsm5P62322 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm5P62322 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.07□□□□□ -0.32
Lsm5P62322 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Lsm5P62322 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm5P62322 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm5P62322 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm5P62322 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm5P62322 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC13.07□□□□□ -0.32
Lsm5P62322 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm5P62322 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm5P62322 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm5P62322 Gm38027-201ENSMUST00000192315 235 ntBASIC13.07□□□□□ -0.32
Lsm5P62322 Gm36967-201ENSMUST00000193814 266 ntBASIC13.07□□□□□ -0.32
Lsm5P62322 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Lsm5P62322 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm5P62322 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm5P62322 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm5P62322 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm5P62322 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm5P62322 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm5P62322 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm5P62322 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm5P62322 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm5P62322 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Lsm5P62322 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm5P62322 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Lsm5P62322 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm5P62322 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm5P62322 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm5P62322 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm5P62322 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm5P62322 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm5P62322 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm5P62322 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm5P62322 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm5P62322 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm5P62322 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm5P62322 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm5P62322 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm5P62322 Gm13186-201ENSMUST00000118031 316 ntBASIC13.06□□□□□ -0.32
Lsm5P62322 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm5P62322 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC13.06□□□□□ -0.32
Lsm5P62322 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC13.06□□□□□ -0.32
Lsm5P62322 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm5P62322 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm5P62322 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm5P62322 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm5P62322 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.06□□□□□ -0.32
Lsm5P62322 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC13.06□□□□□ -0.32
Lsm5P62322 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm5P62322 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm5P62322 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Lsm5P62322 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm5P62322 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm5P62322 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm5P62322 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm5P62322 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm5P62322 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm5P62322 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm5P62322 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm5P62322 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm5P62322 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm5P62322 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Lsm5P62322 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm5P62322 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm5P62322 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm5P62322 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm5P62322 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm5P62322 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm5P62322 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC13.05□□□□□ -0.32
Lsm5P62322 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC13.05□□□□□ -0.32
Lsm5P62322 Gm7791-201ENSMUST00000219066 539 ntBASIC13.05□□□□□ -0.32
Lsm5P62322 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm5P62322 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm5P62322 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm5P62322 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm5P62322 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm5P62322 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm5P62322 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm5P62322 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm5P62322 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Lsm5P62322 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm5P62322 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm5P62322 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms