Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lsm3P62311 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC14.33□□□□□ -0.12
Lsm3P62311 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC14.33□□□□□ -0.12
Lsm3P62311 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Lsm3P62311 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lsm3P62311 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lsm3P62311 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lsm3P62311 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lsm3P62311 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lsm3P62311 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.33□□□□□ -0.12
Lsm3P62311 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lsm3P62311 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lsm3P62311 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lsm3P62311 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Lsm3P62311 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Lsm3P62311 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Lsm3P62311 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lsm3P62311 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm3P62311 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm3P62311 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm3P62311 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm3P62311 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm3P62311 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm3P62311 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm3P62311 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC14.32□□□□□ -0.12
Lsm3P62311 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm3P62311 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm3P62311 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm3P62311 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm3P62311 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Lsm3P62311 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC14.32□□□□□ -0.12
Lsm3P62311 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm3P62311 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm3P62311 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC14.32□□□□□ -0.12
Lsm3P62311 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC14.32□□□□□ -0.12
Lsm3P62311 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm3P62311 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm3P62311 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm3P62311 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm3P62311 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm3P62311 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm3P62311 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm3P62311 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Lsm3P62311 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm3P62311 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm3P62311 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Lsm3P62311 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm3P62311 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm3P62311 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm3P62311 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm3P62311 Dio3-201ENSMUST00000097228 1449 ntBASIC14.32□□□□□ -0.12
Lsm3P62311 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lsm3P62311 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Lsm3P62311 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Lsm3P62311 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lsm3P62311 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Lsm3P62311 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lsm3P62311 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lsm3P62311 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lsm3P62311 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Lsm3P62311 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lsm3P62311 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lsm3P62311 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lsm3P62311 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lsm3P62311 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.31□□□□□ -0.12
Lsm3P62311 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Lsm3P62311 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lsm3P62311 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.31□□□□□ -0.12
Lsm3P62311 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Lsm3P62311 Gm11249-201ENSMUST00000117071 859 ntBASIC14.31□□□□□ -0.12
Lsm3P62311 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC14.31□□□□□ -0.12
Lsm3P62311 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Lsm3P62311 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC14.31□□□□□ -0.12
Lsm3P62311 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC14.31□□□□□ -0.12
Lsm3P62311 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lsm3P62311 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lsm3P62311 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lsm3P62311 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lsm3P62311 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lsm3P62311 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Lsm3P62311 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lsm3P62311 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Lsm3P62311 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC14.31□□□□□ -0.12
Lsm3P62311 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.3□□□□□ -0.12
Lsm3P62311 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Lsm3P62311 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
Lsm3P62311 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lsm3P62311 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.3□□□□□ -0.12
Lsm3P62311 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lsm3P62311 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lsm3P62311 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Lsm3P62311 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lsm3P62311 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Lsm3P62311 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lsm3P62311 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Lsm3P62311 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC14.3□□□□□ -0.12
Lsm3P62311 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Lsm3P62311 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lsm3P62311 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lsm3P62311 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms