Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sec61a1P61620 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sec61a1P61620 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC13.81□□□□□ -0.2
Sec61a1P61620 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC13.81□□□□□ -0.2
Sec61a1P61620 Gm45605-201ENSMUST00000210265 4269 ntBASIC13.81□□□□□ -0.2
Sec61a1P61620 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sec61a1P61620 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sec61a1P61620 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC13.81□□□□□ -0.2
Sec61a1P61620 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Sec61a1P61620 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC13.81□□□□□ -0.2
Sec61a1P61620 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sec61a1P61620 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sec61a1P61620 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sec61a1P61620 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sec61a1P61620 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sec61a1P61620 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sec61a1P61620 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Sec61a1P61620 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sec61a1P61620 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Sec61a1P61620 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sec61a1P61620 Sybu-209ENSMUST00000228639 4113 ntBASIC13.8□□□□□ -0.2
Sec61a1P61620 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sec61a1P61620 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sec61a1P61620 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sec61a1P61620 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Sec61a1P61620 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sec61a1P61620 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC13.8□□□□□ -0.2
Sec61a1P61620 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sec61a1P61620 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sec61a1P61620 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sec61a1P61620 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC13.8□□□□□ -0.2
Sec61a1P61620 Gm11336-201ENSMUST00000118168 334 ntBASIC13.8□□□□□ -0.2
Sec61a1P61620 Ank2-226ENSMUST00000189368 339 ntBASIC13.8□□□□□ -0.2
Sec61a1P61620 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sec61a1P61620 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sec61a1P61620 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC13.8□□□□□ -0.2
Sec61a1P61620 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC13.8□□□□□ -0.2
Sec61a1P61620 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sec61a1P61620 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sec61a1P61620 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sec61a1P61620 Gm42901-201ENSMUST00000197735 3171 ntBASIC13.8□□□□□ -0.2
Sec61a1P61620 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sec61a1P61620 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sec61a1P61620 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Sec61a1P61620 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sec61a1P61620 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sec61a1P61620 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sec61a1P61620 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC13.8□□□□□ -0.2
Sec61a1P61620 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sec61a1P61620 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sec61a1P61620 Gm29340-201ENSMUST00000188763 3854 ntBASIC13.79□□□□□ -0.2
Sec61a1P61620 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sec61a1P61620 App-207ENSMUST00000227737 2827 ntBASIC13.79□□□□□ -0.2
Sec61a1P61620 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Sec61a1P61620 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
Sec61a1P61620 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sec61a1P61620 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sec61a1P61620 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sec61a1P61620 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC13.79□□□□□ -0.2
Sec61a1P61620 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC13.79□□□□□ -0.2
Sec61a1P61620 AC122351.1-201ENSMUST00000220467 126 ntBASIC13.79□□□□□ -0.2
Sec61a1P61620 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Sec61a1P61620 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sec61a1P61620 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sec61a1P61620 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Sec61a1P61620 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sec61a1P61620 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Sec61a1P61620 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
Sec61a1P61620 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sec61a1P61620 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Sec61a1P61620 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Sec61a1P61620 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sec61a1P61620 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sec61a1P61620 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Sec61a1P61620 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Sec61a1P61620 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC13.79□□□□□ -0.2
Sec61a1P61620 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sec61a1P61620 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Sec61a1P61620 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sec61a1P61620 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sec61a1P61620 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sec61a1P61620 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sec61a1P61620 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Sec61a1P61620 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Sec61a1P61620 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sec61a1P61620 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sec61a1P61620 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sec61a1P61620 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sec61a1P61620 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sec61a1P61620 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Sec61a1P61620 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sec61a1P61620 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Sec61a1P61620 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sec61a1P61620 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sec61a1P61620 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Sec61a1P61620 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sec61a1P61620 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Sec61a1P61620 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Sec61a1P61620 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sec61a1P61620 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms