Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sssca1P56873 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sssca1P56873 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC12.67□□□□□ -0.38
Sssca1P56873 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sssca1P56873 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sssca1P56873 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC12.67□□□□□ -0.38
Sssca1P56873 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC12.67□□□□□ -0.38
Sssca1P56873 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Sssca1P56873 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC12.67□□□□□ -0.38
Sssca1P56873 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Sssca1P56873 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sssca1P56873 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sssca1P56873 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sssca1P56873 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Sssca1P56873 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sssca1P56873 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sssca1P56873 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sssca1P56873 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sssca1P56873 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sssca1P56873 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sssca1P56873 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sssca1P56873 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sssca1P56873 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sssca1P56873 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sssca1P56873 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sssca1P56873 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sssca1P56873 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sssca1P56873 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sssca1P56873 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC12.66□□□□□ -0.38
Sssca1P56873 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Sssca1P56873 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sssca1P56873 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC12.66□□□□□ -0.38
Sssca1P56873 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Sssca1P56873 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC12.66□□□□□ -0.38
Sssca1P56873 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC12.66□□□□□ -0.38
Sssca1P56873 Gm13436-201ENSMUST00000120418 567 ntBASIC12.66□□□□□ -0.38
Sssca1P56873 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sssca1P56873 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC12.66□□□□□ -0.38
Sssca1P56873 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sssca1P56873 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sssca1P56873 Mir5130-201ENSMUST00000175160 84 ntBASIC12.66□□□□□ -0.38
Sssca1P56873 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC12.66□□□□□ -0.38
Sssca1P56873 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC12.66□□□□□ -0.38
Sssca1P56873 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC12.66□□□□□ -0.38
Sssca1P56873 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sssca1P56873 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sssca1P56873 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC12.66□□□□□ -0.38
Sssca1P56873 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sssca1P56873 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sssca1P56873 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC12.66□□□□□ -0.38
Sssca1P56873 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sssca1P56873 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sssca1P56873 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sssca1P56873 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sssca1P56873 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sssca1P56873 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sssca1P56873 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sssca1P56873 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sssca1P56873 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sssca1P56873 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sssca1P56873 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sssca1P56873 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sssca1P56873 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sssca1P56873 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Sssca1P56873 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sssca1P56873 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC12.65□□□□□ -0.38
Sssca1P56873 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC12.65□□□□□ -0.38
Sssca1P56873 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC12.65□□□□□ -0.38
Sssca1P56873 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC12.65□□□□□ -0.38
Sssca1P56873 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Sssca1P56873 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sssca1P56873 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Sssca1P56873 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Sssca1P56873 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sssca1P56873 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sssca1P56873 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC12.65□□□□□ -0.38
Sssca1P56873 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sssca1P56873 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Sssca1P56873 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sssca1P56873 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC12.65□□□□□ -0.38
Sssca1P56873 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sssca1P56873 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sssca1P56873 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.39
Sssca1P56873 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Sssca1P56873 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sssca1P56873 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sssca1P56873 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Sssca1P56873 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sssca1P56873 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sssca1P56873 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sssca1P56873 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sssca1P56873 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Sssca1P56873 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Sssca1P56873 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sssca1P56873 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sssca1P56873 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sssca1P56873 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Sssca1P56873 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sssca1P56873 Gm10052-201ENSMUST00000168019 960 ntBASIC12.64□□□□□ -0.39
Sssca1P56873 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms