Protein–RNA interactions for Protein: P54728

Rad23b, UV excision repair protein RAD23 homolog B, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad23bP54728 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Rad23bP54728 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Rad23bP54728 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rad23bP54728 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rad23bP54728 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rad23bP54728 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rad23bP54728 Gm8344-201ENSMUST00000119813 856 ntBASIC19.3■□□□□ 0.68
Rad23bP54728 Gm16215-201ENSMUST00000161990 637 ntBASIC19.3■□□□□ 0.68
Rad23bP54728 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
Rad23bP54728 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC19.3■□□□□ 0.68
Rad23bP54728 Mir7684-201ENSMUST00000183858 60 ntBASIC19.3■□□□□ 0.68
Rad23bP54728 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC19.3■□□□□ 0.68
Rad23bP54728 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC19.3■□□□□ 0.68
Rad23bP54728 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rad23bP54728 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rad23bP54728 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rad23bP54728 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Rad23bP54728 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rad23bP54728 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rad23bP54728 AC119177.1-201ENSMUST00000227647 1332 ntBASIC19.29■□□□□ 0.68
Rad23bP54728 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rad23bP54728 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Rad23bP54728 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rad23bP54728 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rad23bP54728 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rad23bP54728 Gm15693-201ENSMUST00000120470 637 ntBASIC19.29■□□□□ 0.68
Rad23bP54728 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC19.29■□□□□ 0.68
Rad23bP54728 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Rad23bP54728 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Rad23bP54728 Rbfox2-208ENSMUST00000227930 1218 ntBASIC19.29■□□□□ 0.68
Rad23bP54728 AC131710.1-201ENSMUST00000228336 990 ntBASIC19.29■□□□□ 0.68
Rad23bP54728 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rad23bP54728 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rad23bP54728 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rad23bP54728 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rad23bP54728 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rad23bP54728 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Rad23bP54728 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rad23bP54728 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rad23bP54728 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rad23bP54728 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rad23bP54728 Gm25287-201ENSMUST00000103846 110 ntBASIC19.28■□□□□ 0.68
Rad23bP54728 Gm22918-201ENSMUST00000103855 110 ntBASIC19.28■□□□□ 0.68
Rad23bP54728 Gm6912-201ENSMUST00000117218 544 ntBASIC19.28■□□□□ 0.68
Rad23bP54728 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rad23bP54728 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC19.28■□□□□ 0.68
Rad23bP54728 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC19.28■□□□□ 0.68
Rad23bP54728 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Rad23bP54728 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rad23bP54728 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Rad23bP54728 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rad23bP54728 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rad23bP54728 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rad23bP54728 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Rad23bP54728 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Rad23bP54728 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rad23bP54728 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rad23bP54728 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Rad23bP54728 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Rad23bP54728 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC19.27■□□□□ 0.68
Rad23bP54728 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Rad23bP54728 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rad23bP54728 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC19.27■□□□□ 0.68
Rad23bP54728 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rad23bP54728 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC19.27■□□□□ 0.68
Rad23bP54728 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Rad23bP54728 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Rad23bP54728 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rad23bP54728 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rad23bP54728 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Rad23bP54728 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rad23bP54728 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC19.27■□□□□ 0.67
Rad23bP54728 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rad23bP54728 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
Rad23bP54728 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rad23bP54728 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rad23bP54728 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rad23bP54728 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rad23bP54728 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rad23bP54728 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Rad23bP54728 Gm6415-201ENSMUST00000118488 348 ntBASIC19.26■□□□□ 0.67
Rad23bP54728 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
Rad23bP54728 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Rad23bP54728 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rad23bP54728 AC149294.4-201ENSMUST00000227870 882 ntBASIC19.26■□□□□ 0.67
Rad23bP54728 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rad23bP54728 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rad23bP54728 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rad23bP54728 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rad23bP54728 Gm9899-201ENSMUST00000065519 555 ntBASIC19.26■□□□□ 0.67
Rad23bP54728 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rad23bP54728 Gm11841-201ENSMUST00000117060 1963 ntBASIC19.26■□□□□ 0.67
Rad23bP54728 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rad23bP54728 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Rad23bP54728 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rad23bP54728 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rad23bP54728 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rad23bP54728 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Rad23bP54728 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rad23bP54728 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms