Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC19.73■□□□□ 0.75
Msh6P54276 Thap2-203ENSMUST00000218989 527 ntBASIC19.73■□□□□ 0.75
Msh6P54276 Wdyhv1-206ENSMUST00000227142 786 ntBASIC19.73■□□□□ 0.75
Msh6P54276 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Msh6P54276 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Msh6P54276 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
Msh6P54276 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Msh6P54276 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Msh6P54276 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Msh6P54276 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Msh6P54276 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Msh6P54276 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Msh6P54276 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Msh6P54276 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Msh6P54276 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Msh6P54276 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC19.72■□□□□ 0.75
Msh6P54276 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC19.72■□□□□ 0.75
Msh6P54276 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Msh6P54276 Gm5628-201ENSMUST00000222318 1049 ntBASIC19.72■□□□□ 0.75
Msh6P54276 AC160980.1-201ENSMUST00000224136 970 ntBASIC19.72■□□□□ 0.75
Msh6P54276 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Msh6P54276 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Msh6P54276 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Msh6P54276 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Msh6P54276 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Msh6P54276 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Msh6P54276 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Msh6P54276 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Msh6P54276 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Msh6P54276 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Msh6P54276 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Msh6P54276 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Msh6P54276 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Msh6P54276 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Msh6P54276 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC19.71■□□□□ 0.75
Msh6P54276 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Msh6P54276 Gm25948-201ENSMUST00000175334 112 ntBASIC19.71■□□□□ 0.75
Msh6P54276 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Msh6P54276 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Msh6P54276 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Msh6P54276 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Msh6P54276 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Msh6P54276 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Msh6P54276 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Msh6P54276 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Msh6P54276 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Msh6P54276 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Msh6P54276 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Msh6P54276 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Msh6P54276 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Msh6P54276 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Msh6P54276 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Msh6P54276 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Msh6P54276 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Msh6P54276 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Msh6P54276 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC19.7■□□□□ 0.74
Msh6P54276 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Msh6P54276 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC19.7■□□□□ 0.74
Msh6P54276 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC19.7■□□□□ 0.74
Msh6P54276 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Msh6P54276 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Msh6P54276 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Msh6P54276 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Msh6P54276 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Msh6P54276 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Msh6P54276 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Msh6P54276 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC19.7■□□□□ 0.74
Msh6P54276 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Msh6P54276 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Msh6P54276 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Msh6P54276 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Msh6P54276 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Msh6P54276 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Msh6P54276 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC19.7■□□□□ 0.74
Msh6P54276 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Msh6P54276 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Msh6P54276 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Msh6P54276 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC19.7■□□□□ 0.74
Msh6P54276 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC19.7■□□□□ 0.74
Msh6P54276 Gm18889-201ENSMUST00000174284 929 ntBASIC19.7■□□□□ 0.74
Msh6P54276 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Msh6P54276 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Msh6P54276 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Msh6P54276 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC19.69■□□□□ 0.74
Msh6P54276 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Msh6P54276 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Msh6P54276 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
Msh6P54276 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
Msh6P54276 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Msh6P54276 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Msh6P54276 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Msh6P54276 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Msh6P54276 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
Msh6P54276 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Msh6P54276 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Msh6P54276 Rpph1-201ENSMUST00000175096 319 ntBASIC19.69■□□□□ 0.74
Msh6P54276 AC140397.2-201ENSMUST00000224213 834 ntBASIC19.69■□□□□ 0.74
Msh6P54276 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Msh6P54276 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Msh6P54276 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms