Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm9824-201ENSMUST00000178707 561 ntBASIC15.91■□□□□ 0.14
Sox1P53783 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sox1P53783 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Sox1P53783 Gm7775-201ENSMUST00000218871 853 ntBASIC15.91■□□□□ 0.14
Sox1P53783 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Sox1P53783 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC15.91■□□□□ 0.14
Sox1P53783 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sox1P53783 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Sox1P53783 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Sox1P53783 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sox1P53783 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sox1P53783 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Sox1P53783 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sox1P53783 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Sox1P53783 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC15.91■□□□□ 0.14
Sox1P53783 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Sox1P53783 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC15.91■□□□□ 0.14
Sox1P53783 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sox1P53783 Gm45606-201ENSMUST00000209836 2795 ntBASIC15.91■□□□□ 0.14
Sox1P53783 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Sox1P53783 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sox1P53783 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sox1P53783 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sox1P53783 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sox1P53783 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sox1P53783 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Sox1P53783 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sox1P53783 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Sox1P53783 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sox1P53783 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sox1P53783 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sox1P53783 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Sox1P53783 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sox1P53783 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sox1P53783 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Sox1P53783 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC15.9■□□□□ 0.14
Sox1P53783 AY702102-202ENSMUST00000194651 1173 ntBASIC15.9■□□□□ 0.14
Sox1P53783 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC15.9■□□□□ 0.14
Sox1P53783 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Sox1P53783 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Sox1P53783 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Sox1P53783 Gm44832-201ENSMUST00000208849 2303 ntBASIC15.9■□□□□ 0.14
Sox1P53783 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sox1P53783 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Sox1P53783 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC15.9■□□□□ 0.14
Sox1P53783 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
Sox1P53783 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Sox1P53783 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Sox1P53783 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sox1P53783 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sox1P53783 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Sox1P53783 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sox1P53783 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sox1P53783 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Sox1P53783 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sox1P53783 Gm8131-201ENSMUST00000213783 1570 ntBASIC15.89■□□□□ 0.13
Sox1P53783 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sox1P53783 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Sox1P53783 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Sox1P53783 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC15.89■□□□□ 0.13
Sox1P53783 Gm12091-201ENSMUST00000146791 830 ntBASIC15.89■□□□□ 0.13
Sox1P53783 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC15.89■□□□□ 0.13
Sox1P53783 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC15.89■□□□□ 0.13
Sox1P53783 Gm29541-201ENSMUST00000191351 678 ntBASIC15.89■□□□□ 0.13
Sox1P53783 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Sox1P53783 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC15.89■□□□□ 0.13
Sox1P53783 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sox1P53783 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Sox1P53783 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sox1P53783 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sox1P53783 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sox1P53783 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sox1P53783 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Sox1P53783 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sox1P53783 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Sox1P53783 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sox1P53783 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sox1P53783 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sox1P53783 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sox1P53783 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Sox1P53783 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC15.88■□□□□ 0.13
Sox1P53783 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sox1P53783 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Sox1P53783 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sox1P53783 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC15.88■□□□□ 0.13
Sox1P53783 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sox1P53783 Gm14767-201ENSMUST00000121559 586 ntBASIC15.88■□□□□ 0.13
Sox1P53783 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC15.88■□□□□ 0.13
Sox1P53783 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC15.88■□□□□ 0.13
Sox1P53783 Gm25144-201ENSMUST00000179561 110 ntBASIC15.88■□□□□ 0.13
Sox1P53783 Gm25352-201ENSMUST00000179815 110 ntBASIC15.88■□□□□ 0.13
Sox1P53783 Gm28630-201ENSMUST00000187806 498 ntBASIC15.88■□□□□ 0.13
Sox1P53783 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC15.88■□□□□ 0.13
Sox1P53783 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sox1P53783 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sox1P53783 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Sox1P53783 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sox1P53783 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Sox1P53783 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sox1P53783 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms