Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sox18P43680 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Sox18P43680 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC14.96□□□□□ -0.01
Sox18P43680 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sox18P43680 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Sox18P43680 Best4-ps-201ENSMUST00000129783 1380 ntBASIC14.96□□□□□ -0.02
Sox18P43680 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Sox18P43680 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Sox18P43680 Gm26596-201ENSMUST00000180464 2655 ntBASIC14.96□□□□□ -0.02
Sox18P43680 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Sox18P43680 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
Sox18P43680 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Sox18P43680 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC14.96□□□□□ -0.02
Sox18P43680 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Sox18P43680 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sox18P43680 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sox18P43680 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sox18P43680 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Sox18P43680 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sox18P43680 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Sox18P43680 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Sox18P43680 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sox18P43680 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sox18P43680 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sox18P43680 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sox18P43680 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sox18P43680 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC14.95□□□□□ -0.02
Sox18P43680 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Sox18P43680 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Sox18P43680 Gm5177-201ENSMUST00000183092 997 ntBASIC14.95□□□□□ -0.02
Sox18P43680 Gm36967-201ENSMUST00000193814 266 ntBASIC14.95□□□□□ -0.02
Sox18P43680 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC14.95□□□□□ -0.02
Sox18P43680 Gm43125-201ENSMUST00000201724 730 ntBASIC14.95□□□□□ -0.02
Sox18P43680 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sox18P43680 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sox18P43680 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sox18P43680 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sox18P43680 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sox18P43680 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Sox18P43680 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Sox18P43680 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sox18P43680 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sox18P43680 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.95□□□□□ -0.02
Sox18P43680 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sox18P43680 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sox18P43680 Gm8839-201ENSMUST00000121279 1645 ntBASIC14.95□□□□□ -0.02
Sox18P43680 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sox18P43680 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sox18P43680 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sox18P43680 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sox18P43680 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sox18P43680 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sox18P43680 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
Sox18P43680 Gm45774-201ENSMUST00000211992 2665 ntBASIC14.94□□□□□ -0.02
Sox18P43680 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sox18P43680 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Sox18P43680 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sox18P43680 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sox18P43680 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sox18P43680 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Sox18P43680 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Sox18P43680 Gm6226-201ENSMUST00000117765 1146 ntBASIC14.94□□□□□ -0.02
Sox18P43680 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.94□□□□□ -0.02
Sox18P43680 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC14.94□□□□□ -0.02
Sox18P43680 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC14.94□□□□□ -0.02
Sox18P43680 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC14.94□□□□□ -0.02
Sox18P43680 AC125206.2-201ENSMUST00000217454 574 ntBASIC14.94□□□□□ -0.02
Sox18P43680 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Sox18P43680 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Sox18P43680 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Sox18P43680 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sox18P43680 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sox18P43680 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sox18P43680 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Sox18P43680 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sox18P43680 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sox18P43680 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sox18P43680 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sox18P43680 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sox18P43680 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sox18P43680 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sox18P43680 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sox18P43680 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Sox18P43680 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Sox18P43680 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Sox18P43680 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sox18P43680 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sox18P43680 Gm8344-201ENSMUST00000119813 856 ntBASIC14.93□□□□□ -0.02
Sox18P43680 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Sox18P43680 H2-Pa-201ENSMUST00000182803 626 ntBASIC14.93□□□□□ -0.02
Sox18P43680 Gm5628-201ENSMUST00000222318 1049 ntBASIC14.93□□□□□ -0.02
Sox18P43680 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sox18P43680 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Sox18P43680 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Sox18P43680 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Sox18P43680 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Sox18P43680 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sox18P43680 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sox18P43680 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sox18P43680 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms