Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
Hist1h1aP43275 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hist1h1aP43275 Gm43352-201ENSMUST00000196419 3065 ntBASIC12.94□□□□□ -0.34
Hist1h1aP43275 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hist1h1aP43275 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hist1h1aP43275 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hist1h1aP43275 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Hist1h1aP43275 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hist1h1aP43275 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hist1h1aP43275 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Hist1h1aP43275 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hist1h1aP43275 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Hist1h1aP43275 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hist1h1aP43275 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Hist1h1aP43275 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hist1h1aP43275 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC12.93□□□□□ -0.34
Hist1h1aP43275 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hist1h1aP43275 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Hist1h1aP43275 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC12.93□□□□□ -0.34
Hist1h1aP43275 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hist1h1aP43275 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Hist1h1aP43275 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Hist1h1aP43275 Gm27389-201ENSMUST00000183622 195 ntBASIC12.93□□□□□ -0.34
Hist1h1aP43275 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC12.93□□□□□ -0.34
Hist1h1aP43275 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Hist1h1aP43275 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hist1h1aP43275 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hist1h1aP43275 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Hist1h1aP43275 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hist1h1aP43275 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hist1h1aP43275 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hist1h1aP43275 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hist1h1aP43275 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hist1h1aP43275 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Hist1h1aP43275 Gm10584-201ENSMUST00000207036 2628 ntBASIC12.92□□□□□ -0.34
Hist1h1aP43275 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Hist1h1aP43275 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hist1h1aP43275 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hist1h1aP43275 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hist1h1aP43275 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC12.92□□□□□ -0.34
Hist1h1aP43275 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC12.92□□□□□ -0.34
Hist1h1aP43275 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC12.92□□□□□ -0.34
Hist1h1aP43275 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hist1h1aP43275 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Hist1h1aP43275 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Hist1h1aP43275 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hist1h1aP43275 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hist1h1aP43275 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hist1h1aP43275 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hist1h1aP43275 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Hist1h1aP43275 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC12.92□□□□□ -0.34
Hist1h1aP43275 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC12.92□□□□□ -0.34
Hist1h1aP43275 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Hist1h1aP43275 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC12.92□□□□□ -0.34
Hist1h1aP43275 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Hist1h1aP43275 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hist1h1aP43275 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hist1h1aP43275 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hist1h1aP43275 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Hist1h1aP43275 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hist1h1aP43275 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hist1h1aP43275 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Hist1h1aP43275 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hist1h1aP43275 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Hist1h1aP43275 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hist1h1aP43275 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hist1h1aP43275 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hist1h1aP43275 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Hist1h1aP43275 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hist1h1aP43275 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hist1h1aP43275 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hist1h1aP43275 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hist1h1aP43275 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hist1h1aP43275 Gm37736-201ENSMUST00000193564 2802 ntBASIC12.91□□□□□ -0.34
Hist1h1aP43275 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hist1h1aP43275 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hist1h1aP43275 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hist1h1aP43275 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hist1h1aP43275 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hist1h1aP43275 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Hist1h1aP43275 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC12.91□□□□□ -0.34
Hist1h1aP43275 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC12.91□□□□□ -0.34
Hist1h1aP43275 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Hist1h1aP43275 Gm43799-201ENSMUST00000201845 579 ntBASIC12.91□□□□□ -0.34
Hist1h1aP43275 AC134329.2-201ENSMUST00000217897 428 ntBASIC12.91□□□□□ -0.34
Hist1h1aP43275 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Hist1h1aP43275 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC12.91□□□□□ -0.34
Hist1h1aP43275 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hist1h1aP43275 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hist1h1aP43275 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hist1h1aP43275 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Hist1h1aP43275 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Hist1h1aP43275 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hist1h1aP43275 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hist1h1aP43275 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC12.91□□□□□ -0.34
Hist1h1aP43275 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hist1h1aP43275 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hist1h1aP43275 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Hist1h1aP43275 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hist1h1aP43275 Rbfox2-206ENSMUST00000227314 1810 ntBASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms