Protein–RNA interactions for Protein: P42580

Nkx1-2, NK1 transcription factor-related protein 2, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-2P42580 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Nkx1-2P42580 Gm45328-201ENSMUST00000210942 917 ntBASIC19.26■□□□□ 0.67
Nkx1-2P42580 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nkx1-2P42580 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nkx1-2P42580 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nkx1-2P42580 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nkx1-2P42580 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC19.26■□□□□ 0.67
Nkx1-2P42580 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nkx1-2P42580 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Nkx1-2P42580 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nkx1-2P42580 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nkx1-2P42580 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Nkx1-2P42580 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nkx1-2P42580 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nkx1-2P42580 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nkx1-2P42580 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nkx1-2P42580 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC19.25■□□□□ 0.67
Nkx1-2P42580 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nkx1-2P42580 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nkx1-2P42580 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nkx1-2P42580 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nkx1-2P42580 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Nkx1-2P42580 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Nkx1-2P42580 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC19.25■□□□□ 0.67
Nkx1-2P42580 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nkx1-2P42580 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Nkx1-2P42580 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Nkx1-2P42580 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Nkx1-2P42580 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Nkx1-2P42580 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nkx1-2P42580 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nkx1-2P42580 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nkx1-2P42580 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nkx1-2P42580 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nkx1-2P42580 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nkx1-2P42580 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nkx1-2P42580 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Nkx1-2P42580 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nkx1-2P42580 Efs-202ENSMUST00000227037 2540 ntBASIC19.24■□□□□ 0.67
Nkx1-2P42580 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nkx1-2P42580 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nkx1-2P42580 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Nkx1-2P42580 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nkx1-2P42580 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nkx1-2P42580 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Nkx1-2P42580 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nkx1-2P42580 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Nkx1-2P42580 Gm25016-201ENSMUST00000158399 131 ntBASIC19.24■□□□□ 0.67
Nkx1-2P42580 Gm6728-201ENSMUST00000178117 1065 ntBASIC19.24■□□□□ 0.67
Nkx1-2P42580 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Nkx1-2P42580 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Nkx1-2P42580 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
Nkx1-2P42580 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nkx1-2P42580 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC19.24■□□□□ 0.67
Nkx1-2P42580 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Nkx1-2P42580 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nkx1-2P42580 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Nkx1-2P42580 Gm11839-201ENSMUST00000120647 1953 ntBASIC19.24■□□□□ 0.67
Nkx1-2P42580 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Nkx1-2P42580 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
Nkx1-2P42580 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Nkx1-2P42580 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Nkx1-2P42580 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Nkx1-2P42580 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nkx1-2P42580 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Nkx1-2P42580 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Nkx1-2P42580 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nkx1-2P42580 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
Nkx1-2P42580 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Nkx1-2P42580 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nkx1-2P42580 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nkx1-2P42580 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nkx1-2P42580 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nkx1-2P42580 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Nkx1-2P42580 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
Nkx1-2P42580 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
Nkx1-2P42580 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nkx1-2P42580 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nkx1-2P42580 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Nkx1-2P42580 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC19.23■□□□□ 0.67
Nkx1-2P42580 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
Nkx1-2P42580 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nkx1-2P42580 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nkx1-2P42580 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nkx1-2P42580 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Nkx1-2P42580 Gm45504-201ENSMUST00000211407 2107 ntBASIC19.22■□□□□ 0.67
Nkx1-2P42580 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Nkx1-2P42580 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Nkx1-2P42580 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Nkx1-2P42580 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Nkx1-2P42580 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nkx1-2P42580 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nkx1-2P42580 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Nkx1-2P42580 Gm43697-201ENSMUST00000199637 2581 ntBASIC19.22■□□□□ 0.67
Nkx1-2P42580 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nkx1-2P42580 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Nkx1-2P42580 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
Nkx1-2P42580 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Nkx1-2P42580 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Nkx1-2P42580 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms