Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Timp3P39876 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC12.81□□□□□ -0.36
Timp3P39876 Slc35b2-202ENSMUST00000223987 1766 ntBASIC12.81□□□□□ -0.36
Timp3P39876 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Timp3P39876 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Timp3P39876 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Timp3P39876 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Timp3P39876 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Timp3P39876 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Timp3P39876 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Timp3P39876 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Timp3P39876 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Timp3P39876 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Timp3P39876 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC12.81□□□□□ -0.36
Timp3P39876 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Timp3P39876 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC12.81□□□□□ -0.36
Timp3P39876 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Timp3P39876 Gm44357-201ENSMUST00000195897 142 ntBASIC12.81□□□□□ -0.36
Timp3P39876 Gm19658-201ENSMUST00000196231 138 ntBASIC12.81□□□□□ -0.36
Timp3P39876 Gm44367-201ENSMUST00000196836 138 ntBASIC12.81□□□□□ -0.36
Timp3P39876 Gm44350-201ENSMUST00000197197 138 ntBASIC12.81□□□□□ -0.36
Timp3P39876 Gm44390-201ENSMUST00000197533 144 ntBASIC12.81□□□□□ -0.36
Timp3P39876 Gm44313-201ENSMUST00000198018 138 ntBASIC12.81□□□□□ -0.36
Timp3P39876 Gm44486-201ENSMUST00000198508 138 ntBASIC12.81□□□□□ -0.36
Timp3P39876 Gm44314-201ENSMUST00000199263 138 ntBASIC12.81□□□□□ -0.36
Timp3P39876 Gm44394-201ENSMUST00000199558 138 ntBASIC12.81□□□□□ -0.36
Timp3P39876 Gm44484-201ENSMUST00000199873 138 ntBASIC12.81□□□□□ -0.36
Timp3P39876 Gm44466-201ENSMUST00000200264 138 ntBASIC12.81□□□□□ -0.36
Timp3P39876 Gm44359-201ENSMUST00000200671 138 ntBASIC12.81□□□□□ -0.36
Timp3P39876 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Timp3P39876 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Timp3P39876 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Timp3P39876 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Timp3P39876 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Timp3P39876 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Timp3P39876 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Timp3P39876 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Timp3P39876 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Timp3P39876 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Timp3P39876 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC12.81□□□□□ -0.36
Timp3P39876 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Timp3P39876 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Timp3P39876 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Timp3P39876 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Timp3P39876 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Timp3P39876 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Timp3P39876 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Timp3P39876 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Timp3P39876 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Timp3P39876 Prob1-201ENSMUST00000097619 3021 ntBASIC12.8□□□□□ -0.36
Timp3P39876 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC12.8□□□□□ -0.36
Timp3P39876 Gm4535-201ENSMUST00000182274 558 ntBASIC12.8□□□□□ -0.36
Timp3P39876 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Timp3P39876 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC12.8□□□□□ -0.36
Timp3P39876 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC12.8□□□□□ -0.36
Timp3P39876 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Timp3P39876 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Timp3P39876 Gm10355-201ENSMUST00000097146 517 ntBASIC12.8□□□□□ -0.36
Timp3P39876 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Timp3P39876 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Timp3P39876 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Timp3P39876 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Timp3P39876 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Timp3P39876 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Timp3P39876 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Timp3P39876 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Timp3P39876 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Timp3P39876 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Timp3P39876 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Timp3P39876 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Timp3P39876 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Timp3P39876 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Timp3P39876 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Timp3P39876 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Timp3P39876 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Timp3P39876 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Timp3P39876 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Timp3P39876 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Timp3P39876 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Timp3P39876 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Timp3P39876 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Timp3P39876 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Timp3P39876 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC12.79□□□□□ -0.36
Timp3P39876 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Timp3P39876 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Timp3P39876 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Timp3P39876 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC12.79□□□□□ -0.36
Timp3P39876 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Timp3P39876 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Timp3P39876 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Timp3P39876 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC12.79□□□□□ -0.36
Timp3P39876 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC12.79□□□□□ -0.36
Timp3P39876 AC138767.1-201ENSMUST00000222661 415 ntBASIC12.79□□□□□ -0.36
Timp3P39876 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Timp3P39876 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC12.79□□□□□ -0.36
Timp3P39876 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Timp3P39876 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Timp3P39876 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Timp3P39876 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Timp3P39876 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms