Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.97□□□□□ -0.01
Cdh4P39038 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdh4P39038 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdh4P39038 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdh4P39038 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cdh4P39038 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cdh4P39038 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cdh4P39038 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Cdh4P39038 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Cdh4P39038 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cdh4P39038 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cdh4P39038 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cdh4P39038 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cdh4P39038 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cdh4P39038 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cdh4P39038 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC14.96□□□□□ -0.01
Cdh4P39038 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cdh4P39038 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC14.96□□□□□ -0.01
Cdh4P39038 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC14.96□□□□□ -0.01
Cdh4P39038 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC14.96□□□□□ -0.01
Cdh4P39038 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cdh4P39038 AC164629.2-201ENSMUST00000217916 270 ntBASIC14.96□□□□□ -0.01
Cdh4P39038 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.96□□□□□ -0.01
Cdh4P39038 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cdh4P39038 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cdh4P39038 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cdh4P39038 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cdh4P39038 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cdh4P39038 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cdh4P39038 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC14.96□□□□□ -0.01
Cdh4P39038 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
Cdh4P39038 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Cdh4P39038 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cdh4P39038 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Cdh4P39038 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Cdh4P39038 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Cdh4P39038 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Cdh4P39038 Gm38327-201ENSMUST00000195852 1755 ntBASIC14.96□□□□□ -0.02
Cdh4P39038 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Cdh4P39038 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdh4P39038 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdh4P39038 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdh4P39038 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Cdh4P39038 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC14.95□□□□□ -0.02
Cdh4P39038 Gm37584-201ENSMUST00000193595 1290 ntBASIC14.95□□□□□ -0.02
Cdh4P39038 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC14.95□□□□□ -0.02
Cdh4P39038 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC14.95□□□□□ -0.02
Cdh4P39038 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdh4P39038 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdh4P39038 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdh4P39038 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.95□□□□□ -0.02
Cdh4P39038 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Cdh4P39038 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cdh4P39038 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Cdh4P39038 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Cdh4P39038 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cdh4P39038 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cdh4P39038 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cdh4P39038 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Cdh4P39038 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cdh4P39038 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Cdh4P39038 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cdh4P39038 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cdh4P39038 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cdh4P39038 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cdh4P39038 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cdh4P39038 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Cdh4P39038 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cdh4P39038 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cdh4P39038 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cdh4P39038 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cdh4P39038 Gm7461-201ENSMUST00000058918 827 ntBASIC14.94□□□□□ -0.02
Cdh4P39038 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Cdh4P39038 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Cdh4P39038 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Cdh4P39038 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cdh4P39038 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cdh4P39038 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cdh4P39038 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cdh4P39038 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cdh4P39038 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cdh4P39038 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Cdh4P39038 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC14.93□□□□□ -0.02
Cdh4P39038 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cdh4P39038 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cdh4P39038 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cdh4P39038 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Cdh4P39038 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.93□□□□□ -0.02
Cdh4P39038 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cdh4P39038 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14.93□□□□□ -0.02
Cdh4P39038 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cdh4P39038 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC14.93□□□□□ -0.02
Cdh4P39038 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cdh4P39038 Gm13418-201ENSMUST00000119097 944 ntBASIC14.93□□□□□ -0.02
Cdh4P39038 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Cdh4P39038 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Cdh4P39038 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Cdh4P39038 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Cdh4P39038 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.93□□□□□ -0.02
Cdh4P39038 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC14.93□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms