Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Slc6a11P31650 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Slc6a11P31650 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Slc6a11P31650 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Slc6a11P31650 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Slc6a11P31650 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Slc6a11P31650 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Slc6a11P31650 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Slc6a11P31650 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Slc6a11P31650 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Slc6a11P31650 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Slc6a11P31650 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.85□□□□□ -0.03
Slc6a11P31650 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Slc6a11P31650 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Slc6a11P31650 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Slc6a11P31650 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Slc6a11P31650 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Slc6a11P31650 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.85□□□□□ -0.03
Slc6a11P31650 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Slc6a11P31650 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.85□□□□□ -0.03
Slc6a11P31650 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.85□□□□□ -0.03
Slc6a11P31650 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.85□□□□□ -0.03
Slc6a11P31650 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Slc6a11P31650 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Slc6a11P31650 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Slc6a11P31650 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Slc6a11P31650 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Slc6a11P31650 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC14.85□□□□□ -0.03
Slc6a11P31650 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC14.85□□□□□ -0.03
Slc6a11P31650 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC14.85□□□□□ -0.03
Slc6a11P31650 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Slc6a11P31650 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Slc6a11P31650 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Slc6a11P31650 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Slc6a11P31650 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Slc6a11P31650 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Slc6a11P31650 BC037039-201ENSMUST00000192003 2205 ntBASIC14.85□□□□□ -0.03
Slc6a11P31650 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Slc6a11P31650 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Slc6a11P31650 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Slc6a11P31650 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Slc6a11P31650 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Slc6a11P31650 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.85□□□□□ -0.03
Slc6a11P31650 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Slc6a11P31650 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Slc6a11P31650 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Slc6a11P31650 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Slc6a11P31650 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Slc6a11P31650 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Slc6a11P31650 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC14.84□□□□□ -0.03
Slc6a11P31650 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Slc6a11P31650 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Slc6a11P31650 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.84□□□□□ -0.03
Slc6a11P31650 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Slc6a11P31650 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Slc6a11P31650 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Slc6a11P31650 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Slc6a11P31650 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Slc6a11P31650 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Slc6a11P31650 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Slc6a11P31650 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Slc6a11P31650 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Slc6a11P31650 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Slc6a11P31650 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
Slc6a11P31650 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Slc6a11P31650 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Slc6a11P31650 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Slc6a11P31650 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
Slc6a11P31650 Gm9889-202ENSMUST00000206983 1577 ntBASIC14.83□□□□□ -0.04
Slc6a11P31650 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC14.83□□□□□ -0.04
Slc6a11P31650 Gm13884-201ENSMUST00000118103 829 ntBASIC14.83□□□□□ -0.04
Slc6a11P31650 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Slc6a11P31650 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC14.83□□□□□ -0.04
Slc6a11P31650 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Slc6a11P31650 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Slc6a11P31650 Gm43347-201ENSMUST00000200226 580 ntBASIC14.83□□□□□ -0.04
Slc6a11P31650 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC14.83□□□□□ -0.04
Slc6a11P31650 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC14.83□□□□□ -0.04
Slc6a11P31650 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Slc6a11P31650 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Slc6a11P31650 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Slc6a11P31650 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Slc6a11P31650 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Slc6a11P31650 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.83□□□□□ -0.04
Slc6a11P31650 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Slc6a11P31650 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Slc6a11P31650 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Slc6a11P31650 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Slc6a11P31650 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.83□□□□□ -0.04
Slc6a11P31650 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Slc6a11P31650 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Slc6a11P31650 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Slc6a11P31650 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Slc6a11P31650 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Slc6a11P31650 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Slc6a11P31650 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Slc6a11P31650 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Slc6a11P31650 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Slc6a11P31650 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Slc6a11P31650 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms