Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nfkb1P25799 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nfkb1P25799 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nfkb1P25799 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC16.05■□□□□ 0.16
Nfkb1P25799 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC16.05■□□□□ 0.16
Nfkb1P25799 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Nfkb1P25799 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Nfkb1P25799 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC16.05■□□□□ 0.16
Nfkb1P25799 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nfkb1P25799 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nfkb1P25799 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Nfkb1P25799 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nfkb1P25799 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nfkb1P25799 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nfkb1P25799 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nfkb1P25799 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nfkb1P25799 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nfkb1P25799 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nfkb1P25799 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.04■□□□□ 0.16
Nfkb1P25799 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nfkb1P25799 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nfkb1P25799 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nfkb1P25799 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Nfkb1P25799 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nfkb1P25799 Gm11185-201ENSMUST00000117732 1007 ntBASIC16.04■□□□□ 0.16
Nfkb1P25799 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Nfkb1P25799 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC16.04■□□□□ 0.16
Nfkb1P25799 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC16.04■□□□□ 0.16
Nfkb1P25799 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Nfkb1P25799 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC16.04■□□□□ 0.16
Nfkb1P25799 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nfkb1P25799 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nfkb1P25799 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nfkb1P25799 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nfkb1P25799 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
Nfkb1P25799 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nfkb1P25799 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nfkb1P25799 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nfkb1P25799 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Nfkb1P25799 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nfkb1P25799 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nfkb1P25799 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nfkb1P25799 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nfkb1P25799 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC16.04■□□□□ 0.16
Nfkb1P25799 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Nfkb1P25799 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nfkb1P25799 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nfkb1P25799 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.03■□□□□ 0.16
Nfkb1P25799 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Nfkb1P25799 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nfkb1P25799 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Nfkb1P25799 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Nfkb1P25799 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nfkb1P25799 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC16.03■□□□□ 0.16
Nfkb1P25799 Gm4995-201ENSMUST00000117247 432 ntBASIC16.03■□□□□ 0.16
Nfkb1P25799 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Nfkb1P25799 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC16.03■□□□□ 0.16
Nfkb1P25799 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nfkb1P25799 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nfkb1P25799 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nfkb1P25799 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC16.03■□□□□ 0.16
Nfkb1P25799 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Nfkb1P25799 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC16.03■□□□□ 0.16
Nfkb1P25799 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nfkb1P25799 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nfkb1P25799 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nfkb1P25799 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Nfkb1P25799 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nfkb1P25799 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nfkb1P25799 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nfkb1P25799 Gm11873-201ENSMUST00000117877 1304 ntBASIC16.02■□□□□ 0.16
Nfkb1P25799 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Nfkb1P25799 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
Nfkb1P25799 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.02■□□□□ 0.16
Nfkb1P25799 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC16.02■□□□□ 0.16
Nfkb1P25799 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC16.02■□□□□ 0.16
Nfkb1P25799 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC16.02■□□□□ 0.16
Nfkb1P25799 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Nfkb1P25799 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nfkb1P25799 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.02■□□□□ 0.15
Nfkb1P25799 Grk6-207ENSMUST00000225925 2769 ntBASIC16.02■□□□□ 0.15
Nfkb1P25799 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Nfkb1P25799 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Nfkb1P25799 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Nfkb1P25799 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Nfkb1P25799 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.15
Nfkb1P25799 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Nfkb1P25799 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Nfkb1P25799 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nfkb1P25799 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.01■□□□□ 0.15
Nfkb1P25799 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nfkb1P25799 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nfkb1P25799 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nfkb1P25799 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Nfkb1P25799 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nfkb1P25799 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nfkb1P25799 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC16.01■□□□□ 0.15
Nfkb1P25799 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC16.01■□□□□ 0.15
Nfkb1P25799 Gm4899-201ENSMUST00000178708 719 ntBASIC16.01■□□□□ 0.15
Nfkb1P25799 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms