Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
Pde6bP23440 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pde6bP23440 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pde6bP23440 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC17.06■□□□□ 0.32
Pde6bP23440 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Pde6bP23440 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC17.06■□□□□ 0.32
Pde6bP23440 AC117588.1-201ENSMUST00000228510 999 ntBASIC17.06■□□□□ 0.32
Pde6bP23440 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pde6bP23440 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pde6bP23440 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pde6bP23440 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pde6bP23440 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pde6bP23440 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pde6bP23440 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Pde6bP23440 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pde6bP23440 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pde6bP23440 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pde6bP23440 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.06■□□□□ 0.32
Pde6bP23440 Gm8784-201ENSMUST00000222096 1435 ntBASIC17.05■□□□□ 0.32
Pde6bP23440 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pde6bP23440 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC17.05■□□□□ 0.32
Pde6bP23440 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.05■□□□□ 0.32
Pde6bP23440 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pde6bP23440 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Pde6bP23440 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC17.05■□□□□ 0.32
Pde6bP23440 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
Pde6bP23440 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC17.05■□□□□ 0.32
Pde6bP23440 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Pde6bP23440 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pde6bP23440 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pde6bP23440 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pde6bP23440 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
Pde6bP23440 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pde6bP23440 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pde6bP23440 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pde6bP23440 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pde6bP23440 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pde6bP23440 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Pde6bP23440 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pde6bP23440 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pde6bP23440 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pde6bP23440 Gm13216-201ENSMUST00000117145 591 ntBASIC17.04■□□□□ 0.32
Pde6bP23440 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC17.04■□□□□ 0.32
Pde6bP23440 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC17.04■□□□□ 0.32
Pde6bP23440 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pde6bP23440 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC17.04■□□□□ 0.32
Pde6bP23440 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pde6bP23440 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pde6bP23440 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pde6bP23440 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pde6bP23440 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Pde6bP23440 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC17.04■□□□□ 0.32
Pde6bP23440 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
Pde6bP23440 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC17.04■□□□□ 0.32
Pde6bP23440 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Pde6bP23440 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pde6bP23440 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pde6bP23440 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pde6bP23440 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Pde6bP23440 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pde6bP23440 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pde6bP23440 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pde6bP23440 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pde6bP23440 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pde6bP23440 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pde6bP23440 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pde6bP23440 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pde6bP23440 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pde6bP23440 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pde6bP23440 Gm23935-201ENSMUST00000102303 57 ntBASIC17.03■□□□□ 0.32
Pde6bP23440 Gm24270-201ENSMUST00000102326 57 ntBASIC17.03■□□□□ 0.32
Pde6bP23440 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
Pde6bP23440 Gm14822-201ENSMUST00000122247 291 ntBASIC17.03■□□□□ 0.32
Pde6bP23440 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Pde6bP23440 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Pde6bP23440 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC17.03■□□□□ 0.32
Pde6bP23440 Gm24245-201ENSMUST00000157318 57 ntBASIC17.03■□□□□ 0.32
Pde6bP23440 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pde6bP23440 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC17.03■□□□□ 0.32
Pde6bP23440 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pde6bP23440 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pde6bP23440 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pde6bP23440 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pde6bP23440 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pde6bP23440 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pde6bP23440 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pde6bP23440 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Pde6bP23440 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Pde6bP23440 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pde6bP23440 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pde6bP23440 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pde6bP23440 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pde6bP23440 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Pde6bP23440 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Pde6bP23440 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pde6bP23440 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC17.02■□□□□ 0.32
Pde6bP23440 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Pde6bP23440 Gm8344-201ENSMUST00000119813 856 ntBASIC17.02■□□□□ 0.32
Pde6bP23440 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Pde6bP23440 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms