Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Clk1P22518 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Clk1P22518 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Clk1P22518 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Clk1P22518 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.57□□□□□ -0.08
Clk1P22518 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Clk1P22518 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Clk1P22518 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Clk1P22518 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Clk1P22518 Gm14859-201ENSMUST00000117752 357 ntBASIC14.57□□□□□ -0.08
Clk1P22518 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC14.57□□□□□ -0.08
Clk1P22518 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC14.57□□□□□ -0.08
Clk1P22518 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Clk1P22518 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Clk1P22518 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Clk1P22518 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Clk1P22518 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Clk1P22518 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Clk1P22518 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Clk1P22518 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Clk1P22518 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Clk1P22518 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Clk1P22518 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Clk1P22518 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Clk1P22518 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Clk1P22518 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Clk1P22518 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Clk1P22518 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Clk1P22518 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Clk1P22518 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Clk1P22518 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Clk1P22518 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC14.56□□□□□ -0.08
Clk1P22518 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC14.56□□□□□ -0.08
Clk1P22518 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Clk1P22518 Gm27357-201ENSMUST00000183754 135 ntBASIC14.56□□□□□ -0.08
Clk1P22518 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC14.56□□□□□ -0.08
Clk1P22518 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC14.56□□□□□ -0.08
Clk1P22518 AC154471.1-201ENSMUST00000224418 436 ntBASIC14.56□□□□□ -0.08
Clk1P22518 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Clk1P22518 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Clk1P22518 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Clk1P22518 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Clk1P22518 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Clk1P22518 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Clk1P22518 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Clk1P22518 Ankra2-208ENSMUST00000226100 1476 ntBASIC14.56□□□□□ -0.08
Clk1P22518 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Clk1P22518 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Clk1P22518 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Clk1P22518 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Clk1P22518 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Clk1P22518 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Clk1P22518 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Clk1P22518 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Clk1P22518 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Clk1P22518 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Clk1P22518 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Clk1P22518 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Clk1P22518 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Clk1P22518 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Clk1P22518 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Clk1P22518 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Clk1P22518 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Clk1P22518 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Clk1P22518 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
Clk1P22518 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Clk1P22518 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Clk1P22518 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Clk1P22518 Mir3081-201ENSMUST00000175305 84 ntBASIC14.55□□□□□ -0.08
Clk1P22518 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Clk1P22518 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC14.55□□□□□ -0.08
Clk1P22518 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Clk1P22518 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Clk1P22518 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Clk1P22518 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Clk1P22518 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Clk1P22518 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Clk1P22518 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Clk1P22518 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Clk1P22518 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Clk1P22518 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.55□□□□□ -0.08
Clk1P22518 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC14.55□□□□□ -0.08
Clk1P22518 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Clk1P22518 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Clk1P22518 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC14.54□□□□□ -0.08
Clk1P22518 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.54□□□□□ -0.08
Clk1P22518 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Clk1P22518 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Clk1P22518 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Clk1P22518 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
Clk1P22518 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Clk1P22518 Gm5422-201ENSMUST00000050717 2721 ntBASIC14.54□□□□□ -0.08
Clk1P22518 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Clk1P22518 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Clk1P22518 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Clk1P22518 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC14.54□□□□□ -0.08
Clk1P22518 Olfr129-201ENSMUST00000122318 993 ntBASIC14.54□□□□□ -0.08
Clk1P22518 Gm7284-201ENSMUST00000131667 944 ntBASIC14.54□□□□□ -0.08
Clk1P22518 AC153794.1-201ENSMUST00000169148 126 ntBASIC14.54□□□□□ -0.08
Clk1P22518 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms