Protein–RNA interactions for Protein: P16388

Kcna1, Potassium voltage-gated channel subfamily A member 1, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcna1P16388 Gm45167-201ENSMUST00000208007 322 ntBASIC17.71■□□□□ 0.43
Kcna1P16388 AC154222.1-201ENSMUST00000223882 475 ntBASIC17.71■□□□□ 0.43
Kcna1P16388 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Kcna1P16388 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Kcna1P16388 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Kcna1P16388 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Kcna1P16388 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC17.71■□□□□ 0.43
Kcna1P16388 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Kcna1P16388 Ccdc166-201ENSMUST00000182172 2584 ntBASIC17.71■□□□□ 0.43
Kcna1P16388 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Kcna1P16388 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Kcna1P16388 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Kcna1P16388 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Kcna1P16388 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Kcna1P16388 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Kcna1P16388 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Kcna1P16388 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Kcna1P16388 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Kcna1P16388 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Kcna1P16388 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Kcna1P16388 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Kcna1P16388 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Kcna1P16388 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Kcna1P16388 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Kcna1P16388 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Kcna1P16388 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Kcna1P16388 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Kcna1P16388 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Kcna1P16388 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Kcna1P16388 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Kcna1P16388 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Kcna1P16388 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
Kcna1P16388 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Kcna1P16388 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Kcna1P16388 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC17.69■□□□□ 0.42
Kcna1P16388 Gm6443-201ENSMUST00000203599 874 ntBASIC17.69■□□□□ 0.42
Kcna1P16388 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC17.69■□□□□ 0.42
Kcna1P16388 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Kcna1P16388 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Kcna1P16388 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Kcna1P16388 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Kcna1P16388 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Kcna1P16388 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
Kcna1P16388 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Kcna1P16388 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Kcna1P16388 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Kcna1P16388 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Kcna1P16388 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Kcna1P16388 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Kcna1P16388 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC17.68■□□□□ 0.42
Kcna1P16388 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Kcna1P16388 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Kcna1P16388 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Kcna1P16388 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Kcna1P16388 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
Kcna1P16388 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Kcna1P16388 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
Kcna1P16388 Gm11764-201ENSMUST00000120221 623 ntBASIC17.68■□□□□ 0.42
Kcna1P16388 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC17.68■□□□□ 0.42
Kcna1P16388 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC17.68■□□□□ 0.42
Kcna1P16388 Gm4899-201ENSMUST00000178708 719 ntBASIC17.68■□□□□ 0.42
Kcna1P16388 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC17.68■□□□□ 0.42
Kcna1P16388 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC17.68■□□□□ 0.42
Kcna1P16388 Gm37153-201ENSMUST00000193637 231 ntBASIC17.68■□□□□ 0.42
Kcna1P16388 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Kcna1P16388 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC17.68■□□□□ 0.42
Kcna1P16388 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Kcna1P16388 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Kcna1P16388 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC17.68■□□□□ 0.42
Kcna1P16388 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Kcna1P16388 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Kcna1P16388 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Kcna1P16388 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Kcna1P16388 AC133083.1-201ENSMUST00000221736 2209 ntBASIC17.68■□□□□ 0.42
Kcna1P16388 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Kcna1P16388 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Kcna1P16388 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Kcna1P16388 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Kcna1P16388 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Kcna1P16388 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Kcna1P16388 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Kcna1P16388 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Kcna1P16388 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Kcna1P16388 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Kcna1P16388 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Kcna1P16388 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Kcna1P16388 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Kcna1P16388 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Kcna1P16388 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Kcna1P16388 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Kcna1P16388 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Kcna1P16388 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Kcna1P16388 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC17.67■□□□□ 0.42
Kcna1P16388 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC17.67■□□□□ 0.42
Kcna1P16388 Gm7286-201ENSMUST00000182691 1007 ntBASIC17.67■□□□□ 0.42
Kcna1P16388 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC17.67■□□□□ 0.42
Kcna1P16388 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC17.67■□□□□ 0.42
Kcna1P16388 Gm18206-201ENSMUST00000207027 926 ntBASIC17.67■□□□□ 0.42
Kcna1P16388 Gm5364-201ENSMUST00000216789 889 ntBASIC17.67■□□□□ 0.42
Kcna1P16388 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms