Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cntn1P12960 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cntn1P12960 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cntn1P12960 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cntn1P12960 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cntn1P12960 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cntn1P12960 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cntn1P12960 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cntn1P12960 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cntn1P12960 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cntn1P12960 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cntn1P12960 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cntn1P12960 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Cntn1P12960 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cntn1P12960 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cntn1P12960 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC14.98□□□□□ -0.01
Cntn1P12960 Gm13036-201ENSMUST00000117799 748 ntBASIC14.98□□□□□ -0.01
Cntn1P12960 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.98□□□□□ -0.01
Cntn1P12960 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Cntn1P12960 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC14.98□□□□□ -0.01
Cntn1P12960 Gm5364-201ENSMUST00000216789 889 ntBASIC14.98□□□□□ -0.01
Cntn1P12960 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC14.98□□□□□ -0.01
Cntn1P12960 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC14.98□□□□□ -0.01
Cntn1P12960 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.98□□□□□ -0.01
Cntn1P12960 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cntn1P12960 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cntn1P12960 Gm5421-201ENSMUST00000181698 2354 ntBASIC14.98□□□□□ -0.01
Cntn1P12960 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cntn1P12960 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cntn1P12960 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cntn1P12960 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cntn1P12960 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cntn1P12960 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cntn1P12960 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cntn1P12960 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.97□□□□□ -0.01
Cntn1P12960 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cntn1P12960 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cntn1P12960 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cntn1P12960 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cntn1P12960 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC14.97□□□□□ -0.01
Cntn1P12960 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Cntn1P12960 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cntn1P12960 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Cntn1P12960 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cntn1P12960 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cntn1P12960 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cntn1P12960 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cntn1P12960 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Cntn1P12960 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cntn1P12960 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cntn1P12960 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cntn1P12960 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cntn1P12960 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.97□□□□□ -0.01
Cntn1P12960 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cntn1P12960 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cntn1P12960 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC14.97□□□□□ -0.01
Cntn1P12960 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cntn1P12960 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Cntn1P12960 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cntn1P12960 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cntn1P12960 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cntn1P12960 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cntn1P12960 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.97□□□□□ -0.01
Cntn1P12960 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cntn1P12960 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC14.97□□□□□ -0.01
Cntn1P12960 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cntn1P12960 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cntn1P12960 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cntn1P12960 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Cntn1P12960 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cntn1P12960 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cntn1P12960 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC14.96□□□□□ -0.01
Cntn1P12960 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
Cntn1P12960 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC14.96□□□□□ -0.01
Cntn1P12960 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cntn1P12960 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cntn1P12960 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cntn1P12960 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC14.96□□□□□ -0.01
Cntn1P12960 Gm5682-201ENSMUST00000173402 505 ntBASIC14.96□□□□□ -0.01
Cntn1P12960 Gm27628-201ENSMUST00000184911 107 ntBASIC14.96□□□□□ -0.01
Cntn1P12960 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC14.96□□□□□ -0.01
Cntn1P12960 AC093926.2-201ENSMUST00000214468 1228 ntBASIC14.96□□□□□ -0.01
Cntn1P12960 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cntn1P12960 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cntn1P12960 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cntn1P12960 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cntn1P12960 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cntn1P12960 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cntn1P12960 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cntn1P12960 Gm19430-201ENSMUST00000193847 2137 ntBASIC14.96□□□□□ -0.01
Cntn1P12960 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cntn1P12960 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.96□□□□□ -0.01
Cntn1P12960 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cntn1P12960 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
Cntn1P12960 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Cntn1P12960 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Cntn1P12960 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Cntn1P12960 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Cntn1P12960 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Cntn1P12960 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 123.1 ms