Protein–RNA interactions for Protein: P12850

Cxcl1, Growth-regulated alpha protein, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1P12850 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cxcl1P12850 Gm18959-201ENSMUST00000208954 655 ntBASIC12.96□□□□□ -0.33
Cxcl1P12850 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cxcl1P12850 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cxcl1P12850 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC12.96□□□□□ -0.33
Cxcl1P12850 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cxcl1P12850 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Cxcl1P12850 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Cxcl1P12850 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cxcl1P12850 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Cxcl1P12850 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Cxcl1P12850 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC12.96□□□□□ -0.34
Cxcl1P12850 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cxcl1P12850 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Cxcl1P12850 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC12.96□□□□□ -0.34
Cxcl1P12850 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cxcl1P12850 Gm11960-202ENSMUST00000181063 2858 ntBASIC12.95□□□□□ -0.34
Cxcl1P12850 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cxcl1P12850 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cxcl1P12850 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cxcl1P12850 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cxcl1P12850 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cxcl1P12850 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cxcl1P12850 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cxcl1P12850 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cxcl1P12850 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cxcl1P12850 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Cxcl1P12850 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Cxcl1P12850 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
Cxcl1P12850 Zkscan4-202ENSMUST00000225845 1506 ntBASIC12.95□□□□□ -0.34
Cxcl1P12850 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cxcl1P12850 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC12.95□□□□□ -0.34
Cxcl1P12850 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC12.95□□□□□ -0.34
Cxcl1P12850 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC12.95□□□□□ -0.34
Cxcl1P12850 Gm21559-201ENSMUST00000220638 855 ntBASIC12.95□□□□□ -0.34
Cxcl1P12850 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cxcl1P12850 Gm8587-201ENSMUST00000076538 843 ntBASIC12.95□□□□□ -0.34
Cxcl1P12850 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Cxcl1P12850 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cxcl1P12850 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC12.95□□□□□ -0.34
Cxcl1P12850 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cxcl1P12850 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cxcl1P12850 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cxcl1P12850 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cxcl1P12850 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cxcl1P12850 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cxcl1P12850 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cxcl1P12850 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cxcl1P12850 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cxcl1P12850 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cxcl1P12850 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cxcl1P12850 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC12.94□□□□□ -0.34
Cxcl1P12850 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cxcl1P12850 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cxcl1P12850 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cxcl1P12850 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cxcl1P12850 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cxcl1P12850 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cxcl1P12850 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cxcl1P12850 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Cxcl1P12850 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Cxcl1P12850 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cxcl1P12850 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Cxcl1P12850 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cxcl1P12850 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Cxcl1P12850 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cxcl1P12850 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Cxcl1P12850 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cxcl1P12850 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cxcl1P12850 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cxcl1P12850 Gm11355-201ENSMUST00000121120 306 ntBASIC12.94□□□□□ -0.34
Cxcl1P12850 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC12.94□□□□□ -0.34
Cxcl1P12850 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Cxcl1P12850 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cxcl1P12850 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC12.94□□□□□ -0.34
Cxcl1P12850 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cxcl1P12850 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cxcl1P12850 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cxcl1P12850 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cxcl1P12850 Gm37736-201ENSMUST00000193564 2802 ntBASIC12.94□□□□□ -0.34
Cxcl1P12850 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cxcl1P12850 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cxcl1P12850 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cxcl1P12850 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cxcl1P12850 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Cxcl1P12850 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Cxcl1P12850 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cxcl1P12850 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cxcl1P12850 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
Cxcl1P12850 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cxcl1P12850 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cxcl1P12850 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cxcl1P12850 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cxcl1P12850 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC12.93□□□□□ -0.34
Cxcl1P12850 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Cxcl1P12850 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC12.93□□□□□ -0.34
Cxcl1P12850 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Cxcl1P12850 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cxcl1P12850 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Cxcl1P12850 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms