Protein–RNA interactions for Protein: P09084

Pax1, Paired box protein Pax-1, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pax1P09084 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pax1P09084 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pax1P09084 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC12.73□□□□□ -0.37
Pax1P09084 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pax1P09084 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pax1P09084 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pax1P09084 Gm37305-201ENSMUST00000195714 4279 ntBASIC12.73□□□□□ -0.37
Pax1P09084 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Pax1P09084 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pax1P09084 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pax1P09084 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pax1P09084 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pax1P09084 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pax1P09084 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pax1P09084 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pax1P09084 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Pax1P09084 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pax1P09084 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pax1P09084 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pax1P09084 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pax1P09084 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pax1P09084 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Pax1P09084 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pax1P09084 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pax1P09084 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Pax1P09084 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pax1P09084 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pax1P09084 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pax1P09084 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pax1P09084 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pax1P09084 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC12.72□□□□□ -0.37
Pax1P09084 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pax1P09084 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pax1P09084 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pax1P09084 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Pax1P09084 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pax1P09084 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pax1P09084 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC12.72□□□□□ -0.37
Pax1P09084 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pax1P09084 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pax1P09084 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pax1P09084 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pax1P09084 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pax1P09084 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pax1P09084 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC12.72□□□□□ -0.37
Pax1P09084 Gm13436-201ENSMUST00000120418 567 ntBASIC12.72□□□□□ -0.37
Pax1P09084 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pax1P09084 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC12.72□□□□□ -0.37
Pax1P09084 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pax1P09084 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pax1P09084 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pax1P09084 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pax1P09084 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pax1P09084 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pax1P09084 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pax1P09084 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pax1P09084 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pax1P09084 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pax1P09084 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pax1P09084 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pax1P09084 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pax1P09084 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pax1P09084 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pax1P09084 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pax1P09084 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pax1P09084 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pax1P09084 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pax1P09084 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pax1P09084 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC12.71□□□□□ -0.37
Pax1P09084 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pax1P09084 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pax1P09084 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pax1P09084 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pax1P09084 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pax1P09084 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC12.71□□□□□ -0.37
Pax1P09084 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pax1P09084 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Pax1P09084 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pax1P09084 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC12.71□□□□□ -0.37
Pax1P09084 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pax1P09084 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pax1P09084 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pax1P09084 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Pax1P09084 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pax1P09084 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pax1P09084 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pax1P09084 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Pax1P09084 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pax1P09084 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pax1P09084 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pax1P09084 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pax1P09084 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Pax1P09084 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pax1P09084 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.38
Pax1P09084 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pax1P09084 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Pax1P09084 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pax1P09084 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pax1P09084 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pax1P09084 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms