Protein–RNA interactions for Protein: P06336

Ig epsilon chain C region, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06336 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
P06336 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
P06336 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC14.43□□□□□ -0.1
P06336 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
P06336 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
P06336 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
P06336 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
P06336 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
P06336 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
P06336 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
P06336 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
P06336 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
P06336 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14.43□□□□□ -0.1
P06336 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
P06336 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
P06336 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
P06336 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
P06336 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
P06336 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
P06336 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
P06336 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
P06336 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
P06336 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
P06336 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
P06336 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
P06336 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
P06336 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
P06336 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
P06336 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
P06336 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.42□□□□□ -0.1
P06336 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
P06336 Gm13418-201ENSMUST00000119097 944 ntBASIC14.42□□□□□ -0.1
P06336 Gm8344-201ENSMUST00000119813 856 ntBASIC14.42□□□□□ -0.1
P06336 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
P06336 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC14.42□□□□□ -0.1
P06336 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC14.42□□□□□ -0.1
P06336 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
P06336 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
P06336 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
P06336 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.42□□□□□ -0.1
P06336 Prob1-201ENSMUST00000097619 3021 ntBASIC14.42□□□□□ -0.1
P06336 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
P06336 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
P06336 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
P06336 Gm42918-201ENSMUST00000199249 1580 ntBASIC14.42□□□□□ -0.1
P06336 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
P06336 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
P06336 App-207ENSMUST00000227737 2827 ntBASIC14.42□□□□□ -0.1
P06336 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
P06336 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
P06336 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
P06336 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
P06336 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.41□□□□□ -0.1
P06336 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
P06336 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
P06336 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
P06336 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
P06336 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.41□□□□□ -0.1
P06336 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
P06336 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
P06336 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
P06336 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
P06336 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC14.41□□□□□ -0.1
P06336 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC14.41□□□□□ -0.1
P06336 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC14.41□□□□□ -0.1
P06336 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC14.41□□□□□ -0.1
P06336 Gm19164-201ENSMUST00000210667 640 ntBASIC14.41□□□□□ -0.1
P06336 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.41□□□□□ -0.1
P06336 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
P06336 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
P06336 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
P06336 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
P06336 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
P06336 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
P06336 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.41□□□□□ -0.1
P06336 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
P06336 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
P06336 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
P06336 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
P06336 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
P06336 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
P06336 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.41□□□□□ -0.1
P06336 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
P06336 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
P06336 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
P06336 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
P06336 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
P06336 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
P06336 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
P06336 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
P06336 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
P06336 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
P06336 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
P06336 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
P06336 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
P06336 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
P06336 Gm13884-201ENSMUST00000118103 829 ntBASIC14.4□□□□□ -0.1
P06336 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC14.4□□□□□ -0.1
P06336 Gm11780-201ENSMUST00000136880 516 ntBASIC14.4□□□□□ -0.1
P06336 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms