Protein–RNA interactions for Protein: P02301

H3f3c, Histone H3.3C, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3cP02301 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
H3f3cP02301 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
H3f3cP02301 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
H3f3cP02301 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
H3f3cP02301 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
H3f3cP02301 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
H3f3cP02301 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
H3f3cP02301 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
H3f3cP02301 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
H3f3cP02301 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
H3f3cP02301 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
H3f3cP02301 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC13.43□□□□□ -0.26
H3f3cP02301 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
H3f3cP02301 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
H3f3cP02301 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
H3f3cP02301 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
H3f3cP02301 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
H3f3cP02301 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC13.43□□□□□ -0.26
H3f3cP02301 Gm27867-201ENSMUST00000184778 125 ntBASIC13.43□□□□□ -0.26
H3f3cP02301 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC13.43□□□□□ -0.26
H3f3cP02301 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC13.43□□□□□ -0.26
H3f3cP02301 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
H3f3cP02301 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
H3f3cP02301 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
H3f3cP02301 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
H3f3cP02301 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
H3f3cP02301 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
H3f3cP02301 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
H3f3cP02301 AC153526.5-201ENSMUST00000218661 2147 ntBASIC13.43□□□□□ -0.26
H3f3cP02301 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
H3f3cP02301 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
H3f3cP02301 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
H3f3cP02301 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
H3f3cP02301 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
H3f3cP02301 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
H3f3cP02301 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
H3f3cP02301 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
H3f3cP02301 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC13.43□□□□□ -0.26
H3f3cP02301 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.42□□□□□ -0.26
H3f3cP02301 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
H3f3cP02301 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
H3f3cP02301 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
H3f3cP02301 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
H3f3cP02301 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC13.42□□□□□ -0.26
H3f3cP02301 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
H3f3cP02301 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
H3f3cP02301 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
H3f3cP02301 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
H3f3cP02301 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
H3f3cP02301 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
H3f3cP02301 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC13.42□□□□□ -0.26
H3f3cP02301 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC13.42□□□□□ -0.26
H3f3cP02301 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC13.42□□□□□ -0.26
H3f3cP02301 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC13.42□□□□□ -0.26
H3f3cP02301 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC13.42□□□□□ -0.26
H3f3cP02301 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
H3f3cP02301 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
H3f3cP02301 Birc2-201ENSMUST00000054878 378 ntBASIC13.42□□□□□ -0.26
H3f3cP02301 Spr-ps1-201ENSMUST00000089584 605 ntBASIC13.42□□□□□ -0.26
H3f3cP02301 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
H3f3cP02301 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
H3f3cP02301 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
H3f3cP02301 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC13.42□□□□□ -0.26
H3f3cP02301 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
H3f3cP02301 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
H3f3cP02301 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
H3f3cP02301 Gm16011-201ENSMUST00000121567 2662 ntBASIC13.42□□□□□ -0.26
H3f3cP02301 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
H3f3cP02301 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
H3f3cP02301 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
H3f3cP02301 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
H3f3cP02301 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC13.41□□□□□ -0.26
H3f3cP02301 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
H3f3cP02301 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
H3f3cP02301 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
H3f3cP02301 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
H3f3cP02301 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC13.41□□□□□ -0.26
H3f3cP02301 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
H3f3cP02301 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
H3f3cP02301 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
H3f3cP02301 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
H3f3cP02301 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
H3f3cP02301 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC13.41□□□□□ -0.26
H3f3cP02301 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
H3f3cP02301 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
H3f3cP02301 Gm7935-201ENSMUST00000100555 1278 ntBASIC13.41□□□□□ -0.26
H3f3cP02301 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC13.41□□□□□ -0.26
H3f3cP02301 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
H3f3cP02301 Gm25745-201ENSMUST00000174945 133 ntBASIC13.41□□□□□ -0.26
H3f3cP02301 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
H3f3cP02301 Gm17971-201ENSMUST00000190239 806 ntBASIC13.41□□□□□ -0.26
H3f3cP02301 Vti1a-206ENSMUST00000225529 1244 ntBASIC13.41□□□□□ -0.26
H3f3cP02301 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
H3f3cP02301 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
H3f3cP02301 AC133083.1-201ENSMUST00000221736 2209 ntBASIC13.41□□□□□ -0.26
H3f3cP02301 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
H3f3cP02301 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
H3f3cP02301 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
H3f3cP02301 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
H3f3cP02301 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms