Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
SIX6O95475 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SIX6O95475 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
SIX6O95475 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC15.52■□□□□ 0.08
SIX6O95475 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC15.52■□□□□ 0.08
SIX6O95475 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SIX6O95475 AC100791.3-201ENST00000617619 330 ntBASIC15.52■□□□□ 0.08
SIX6O95475 AL136967.2-201ENST00000623968 743 ntBASIC15.52■□□□□ 0.08
SIX6O95475 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC15.52■□□□□ 0.08
SIX6O95475 MYCNOS-205ENST00000641950 531 ntBASIC15.52■□□□□ 0.08
SIX6O95475 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SIX6O95475 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SIX6O95475 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC15.52■□□□□ 0.07
SIX6O95475 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.07
SIX6O95475 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
SIX6O95475 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
SIX6O95475 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC15.52■□□□□ 0.07
SIX6O95475 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
SIX6O95475 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC15.52■□□□□ 0.07
SIX6O95475 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC15.52■□□□□ 0.07
SIX6O95475 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SIX6O95475 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
SIX6O95475 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SIX6O95475 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SIX6O95475 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SIX6O95475 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SIX6O95475 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SIX6O95475 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SIX6O95475 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SIX6O95475 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SIX6O95475 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
SIX6O95475 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC15.51■□□□□ 0.07
SIX6O95475 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SIX6O95475 AP001094.4-201ENST00000579008 2176 ntBASIC15.51■□□□□ 0.07
SIX6O95475 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15.51■□□□□ 0.07
SIX6O95475 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SIX6O95475 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SIX6O95475 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SIX6O95475 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
SIX6O95475 AC096631.2-201ENST00000436136 790 ntBASIC15.51■□□□□ 0.07
SIX6O95475 RHOF-204ENST00000537265 699 ntTSL 2 BASIC15.51■□□□□ 0.07
SIX6O95475 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SIX6O95475 C2orf69P4-201ENST00000565394 541 ntBASIC15.51■□□□□ 0.07
SIX6O95475 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SIX6O95475 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC15.51■□□□□ 0.07
SIX6O95475 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC15.51■□□□□ 0.07
SIX6O95475 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC15.51■□□□□ 0.07
SIX6O95475 AC106739.1-201ENST00000617035 715 ntBASIC15.51■□□□□ 0.07
SIX6O95475 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SIX6O95475 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SIX6O95475 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SIX6O95475 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SIX6O95475 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SIX6O95475 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SIX6O95475 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC15.51■□□□□ 0.07
SIX6O95475 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
SIX6O95475 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.51■□□□□ 0.07
SIX6O95475 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SIX6O95475 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SIX6O95475 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SIX6O95475 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
SIX6O95475 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SIX6O95475 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
SIX6O95475 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC15.5■□□□□ 0.07
SIX6O95475 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
SIX6O95475 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
SIX6O95475 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SIX6O95475 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
SIX6O95475 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
SIX6O95475 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC15.5■□□□□ 0.07
SIX6O95475 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
SIX6O95475 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SIX6O95475 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SIX6O95475 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SIX6O95475 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SIX6O95475 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SIX6O95475 TFG-210ENST00000620299 1289 ntTSL 5 BASIC15.5■□□□□ 0.07
SIX6O95475 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
SIX6O95475 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
SIX6O95475 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
SIX6O95475 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SIX6O95475 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC15.5■□□□□ 0.07
SIX6O95475 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SIX6O95475 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
SIX6O95475 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SIX6O95475 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SIX6O95475 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
SIX6O95475 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC15.5■□□□□ 0.07
SIX6O95475 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC15.5■□□□□ 0.07
SIX6O95475 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC15.5■□□□□ 0.07
SIX6O95475 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC15.5■□□□□ 0.07
SIX6O95475 OR6D1P-203ENST00000641209 4860 ntBASIC15.5■□□□□ 0.07
SIX6O95475 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC15.5■□□□□ 0.07
SIX6O95475 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SIX6O95475 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SIX6O95475 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SIX6O95475 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SIX6O95475 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
SIX6O95475 NARF-204ENST00000390006 1766 ntTSL 2 BASIC15.49■□□□□ 0.07
SIX6O95475 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms