Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Hcn1O88704 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Hcn1O88704 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Hcn1O88704 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC15□□□□□ -0.01
Hcn1O88704 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Hcn1O88704 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hcn1O88704 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hcn1O88704 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hcn1O88704 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hcn1O88704 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hcn1O88704 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Hcn1O88704 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hcn1O88704 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Hcn1O88704 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Hcn1O88704 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC14.99□□□□□ -0.01
Hcn1O88704 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC14.99□□□□□ -0.01
Hcn1O88704 Gm36967-201ENSMUST00000193814 266 ntBASIC14.99□□□□□ -0.01
Hcn1O88704 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC14.99□□□□□ -0.01
Hcn1O88704 AC124569.2-201ENSMUST00000225998 818 ntBASIC14.99□□□□□ -0.01
Hcn1O88704 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Hcn1O88704 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
Hcn1O88704 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hcn1O88704 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hcn1O88704 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Hcn1O88704 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hcn1O88704 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hcn1O88704 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Hcn1O88704 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hcn1O88704 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hcn1O88704 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hcn1O88704 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hcn1O88704 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hcn1O88704 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC14.98□□□□□ -0.01
Hcn1O88704 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Hcn1O88704 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hcn1O88704 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hcn1O88704 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hcn1O88704 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.98□□□□□ -0.01
Hcn1O88704 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Hcn1O88704 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hcn1O88704 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Hcn1O88704 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC14.98□□□□□ -0.01
Hcn1O88704 Gm13312-201ENSMUST00000119631 718 ntBASIC14.98□□□□□ -0.01
Hcn1O88704 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Hcn1O88704 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Hcn1O88704 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Hcn1O88704 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Hcn1O88704 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC14.98□□□□□ -0.01
Hcn1O88704 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hcn1O88704 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Hcn1O88704 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Hcn1O88704 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Hcn1O88704 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hcn1O88704 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hcn1O88704 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hcn1O88704 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hcn1O88704 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hcn1O88704 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
Hcn1O88704 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Hcn1O88704 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hcn1O88704 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Hcn1O88704 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hcn1O88704 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hcn1O88704 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.97□□□□□ -0.01
Hcn1O88704 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hcn1O88704 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hcn1O88704 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC14.97□□□□□ -0.01
Hcn1O88704 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Hcn1O88704 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC14.97□□□□□ -0.01
Hcn1O88704 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC14.97□□□□□ -0.01
Hcn1O88704 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC14.97□□□□□ -0.01
Hcn1O88704 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hcn1O88704 AC153794.1-201ENSMUST00000169148 126 ntBASIC14.97□□□□□ -0.01
Hcn1O88704 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC14.97□□□□□ -0.01
Hcn1O88704 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Hcn1O88704 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hcn1O88704 Gm17971-201ENSMUST00000190239 806 ntBASIC14.97□□□□□ -0.01
Hcn1O88704 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Hcn1O88704 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hcn1O88704 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hcn1O88704 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hcn1O88704 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Hcn1O88704 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hcn1O88704 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hcn1O88704 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hcn1O88704 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.97□□□□□ -0.01
Hcn1O88704 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hcn1O88704 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hcn1O88704 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Hcn1O88704 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Hcn1O88704 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Hcn1O88704 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Hcn1O88704 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Hcn1O88704 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Hcn1O88704 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Hcn1O88704 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Hcn1O88704 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Hcn1O88704 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC14.96□□□□□ -0.01
Hcn1O88704 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Hcn1O88704 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms