Protein–RNA interactions for Protein: O88508

Dnmt3a, DNA (cytosine-5)-methyltransferase 3A, mousemouse

Known RBP Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnmt3aO88508 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Dnmt3aO88508 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Dnmt3aO88508 AC159301.1-201ENSMUST00000225130 1182 ntBASIC15.72■□□□□ 0.11
Dnmt3aO88508 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Dnmt3aO88508 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Dnmt3aO88508 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Dnmt3aO88508 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Dnmt3aO88508 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Dnmt3aO88508 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Dnmt3aO88508 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Dnmt3aO88508 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
Dnmt3aO88508 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Dnmt3aO88508 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Dnmt3aO88508 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Dnmt3aO88508 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Dnmt3aO88508 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Dnmt3aO88508 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Dnmt3aO88508 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Dnmt3aO88508 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Dnmt3aO88508 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Dnmt3aO88508 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Dnmt3aO88508 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Dnmt3aO88508 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Dnmt3aO88508 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Dnmt3aO88508 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Dnmt3aO88508 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Dnmt3aO88508 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC15.71■□□□□ 0.11
Dnmt3aO88508 Gm12497-201ENSMUST00000138778 237 ntBASIC15.71■□□□□ 0.11
Dnmt3aO88508 Gm27741-201ENSMUST00000185060 237 ntBASIC15.71■□□□□ 0.11
Dnmt3aO88508 Gm13830-205ENSMUST00000201195 1155 ntBASIC15.71■□□□□ 0.11
Dnmt3aO88508 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Dnmt3aO88508 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Dnmt3aO88508 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Dnmt3aO88508 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Dnmt3aO88508 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Dnmt3aO88508 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
Dnmt3aO88508 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Dnmt3aO88508 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC15.71■□□□□ 0.11
Dnmt3aO88508 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Dnmt3aO88508 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Dnmt3aO88508 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC15.71■□□□□ 0.11
Dnmt3aO88508 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Dnmt3aO88508 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
Dnmt3aO88508 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Dnmt3aO88508 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Dnmt3aO88508 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
Dnmt3aO88508 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Dnmt3aO88508 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Dnmt3aO88508 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Dnmt3aO88508 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Dnmt3aO88508 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Dnmt3aO88508 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Dnmt3aO88508 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Dnmt3aO88508 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Dnmt3aO88508 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Dnmt3aO88508 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Dnmt3aO88508 Gm4459-201ENSMUST00000118750 468 ntBASIC15.7■□□□□ 0.1
Dnmt3aO88508 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Dnmt3aO88508 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15.7■□□□□ 0.1
Dnmt3aO88508 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Dnmt3aO88508 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Dnmt3aO88508 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Dnmt3aO88508 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Dnmt3aO88508 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Dnmt3aO88508 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Dnmt3aO88508 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Dnmt3aO88508 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Dnmt3aO88508 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Dnmt3aO88508 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Dnmt3aO88508 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Dnmt3aO88508 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Dnmt3aO88508 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Dnmt3aO88508 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Dnmt3aO88508 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Dnmt3aO88508 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Dnmt3aO88508 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Dnmt3aO88508 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Dnmt3aO88508 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Dnmt3aO88508 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Dnmt3aO88508 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Dnmt3aO88508 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Dnmt3aO88508 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Dnmt3aO88508 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC15.69■□□□□ 0.1
Dnmt3aO88508 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Dnmt3aO88508 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC15.69■□□□□ 0.1
Dnmt3aO88508 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Dnmt3aO88508 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC15.69■□□□□ 0.1
Dnmt3aO88508 Gm6257-201ENSMUST00000163864 910 ntBASIC15.69■□□□□ 0.1
Dnmt3aO88508 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC15.69■□□□□ 0.1
Dnmt3aO88508 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Dnmt3aO88508 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC15.69■□□□□ 0.1
Dnmt3aO88508 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC15.69■□□□□ 0.1
Dnmt3aO88508 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Dnmt3aO88508 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Dnmt3aO88508 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Dnmt3aO88508 Wnt10b-206ENSMUST00000228546 2709 ntBASIC15.69■□□□□ 0.1
Dnmt3aO88508 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Dnmt3aO88508 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Dnmt3aO88508 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Dnmt3aO88508 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms