Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vti1bO88384 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Vti1bO88384 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Vti1bO88384 Zkscan4-202ENSMUST00000225845 1506 ntBASIC14.95□□□□□ -0.02
Vti1bO88384 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Vti1bO88384 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Vti1bO88384 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vti1bO88384 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.95□□□□□ -0.02
Vti1bO88384 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Vti1bO88384 AC163637.1-201ENSMUST00000215491 1894 ntBASIC14.95□□□□□ -0.02
Vti1bO88384 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Vti1bO88384 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vti1bO88384 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.94□□□□□ -0.02
Vti1bO88384 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vti1bO88384 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vti1bO88384 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vti1bO88384 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
Vti1bO88384 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vti1bO88384 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
Vti1bO88384 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vti1bO88384 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vti1bO88384 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vti1bO88384 Gm15442-201ENSMUST00000117905 1527 ntBASIC14.94□□□□□ -0.02
Vti1bO88384 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Vti1bO88384 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Vti1bO88384 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC14.94□□□□□ -0.02
Vti1bO88384 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vti1bO88384 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Vti1bO88384 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Vti1bO88384 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC14.94□□□□□ -0.02
Vti1bO88384 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vti1bO88384 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vti1bO88384 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vti1bO88384 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vti1bO88384 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vti1bO88384 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.94□□□□□ -0.02
Vti1bO88384 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Vti1bO88384 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vti1bO88384 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vti1bO88384 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Vti1bO88384 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Vti1bO88384 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vti1bO88384 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
Vti1bO88384 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Vti1bO88384 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vti1bO88384 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Vti1bO88384 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.93□□□□□ -0.02
Vti1bO88384 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vti1bO88384 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Vti1bO88384 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vti1bO88384 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.93□□□□□ -0.02
Vti1bO88384 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Vti1bO88384 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vti1bO88384 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vti1bO88384 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vti1bO88384 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Vti1bO88384 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vti1bO88384 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Vti1bO88384 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vti1bO88384 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Vti1bO88384 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vti1bO88384 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Vti1bO88384 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Vti1bO88384 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vti1bO88384 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vti1bO88384 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC14.93□□□□□ -0.02
Vti1bO88384 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Vti1bO88384 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Vti1bO88384 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Vti1bO88384 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vti1bO88384 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vti1bO88384 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vti1bO88384 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.93□□□□□ -0.02
Vti1bO88384 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Vti1bO88384 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vti1bO88384 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Vti1bO88384 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Vti1bO88384 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Vti1bO88384 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Vti1bO88384 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vti1bO88384 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vti1bO88384 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vti1bO88384 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vti1bO88384 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vti1bO88384 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vti1bO88384 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vti1bO88384 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Vti1bO88384 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vti1bO88384 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vti1bO88384 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC14.92□□□□□ -0.02
Vti1bO88384 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC14.92□□□□□ -0.02
Vti1bO88384 Gm45328-201ENSMUST00000210942 917 ntBASIC14.92□□□□□ -0.02
Vti1bO88384 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vti1bO88384 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vti1bO88384 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vti1bO88384 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.92□□□□□ -0.02
Vti1bO88384 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vti1bO88384 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
Vti1bO88384 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Vti1bO88384 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms