Protein–RNA interactions for Protein: O88322

Nid2, Nidogen-2, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nid2O88322 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Nid2O88322 Gm11543-201ENSMUST00000120758 370 ntBASIC20.18■□□□□ 0.82
Nid2O88322 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Nid2O88322 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Nid2O88322 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC20.17■□□□□ 0.82
Nid2O88322 Gm38327-201ENSMUST00000195852 1755 ntBASIC20.17■□□□□ 0.82
Nid2O88322 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nid2O88322 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nid2O88322 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nid2O88322 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nid2O88322 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nid2O88322 Gm13517-201ENSMUST00000120782 1495 ntBASIC20.17■□□□□ 0.82
Nid2O88322 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Nid2O88322 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Nid2O88322 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nid2O88322 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nid2O88322 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Nid2O88322 Gm16026-204ENSMUST00000162652 683 ntBASIC20.17■□□□□ 0.82
Nid2O88322 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC20.17■□□□□ 0.82
Nid2O88322 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Nid2O88322 Gm27989-201ENSMUST00000184721 107 ntBASIC20.17■□□□□ 0.82
Nid2O88322 Gm28630-201ENSMUST00000187806 498 ntBASIC20.17■□□□□ 0.82
Nid2O88322 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Nid2O88322 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nid2O88322 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Nid2O88322 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Nid2O88322 Gm26596-201ENSMUST00000180464 2655 ntBASIC20.16■□□□□ 0.82
Nid2O88322 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nid2O88322 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nid2O88322 Gm8410-201ENSMUST00000117225 605 ntBASIC20.16■□□□□ 0.82
Nid2O88322 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC20.16■□□□□ 0.82
Nid2O88322 Gm25144-201ENSMUST00000179561 110 ntBASIC20.16■□□□□ 0.82
Nid2O88322 Gm25352-201ENSMUST00000179815 110 ntBASIC20.16■□□□□ 0.82
Nid2O88322 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nid2O88322 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nid2O88322 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC20.16■□□□□ 0.82
Nid2O88322 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nid2O88322 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nid2O88322 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nid2O88322 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Nid2O88322 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nid2O88322 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Nid2O88322 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Nid2O88322 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nid2O88322 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nid2O88322 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nid2O88322 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Nid2O88322 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC20.15■□□□□ 0.82
Nid2O88322 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nid2O88322 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Nid2O88322 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
Nid2O88322 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nid2O88322 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nid2O88322 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC20.15■□□□□ 0.82
Nid2O88322 Gm42934-201ENSMUST00000196920 1345 ntBASIC20.15■□□□□ 0.82
Nid2O88322 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nid2O88322 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Nid2O88322 Gm44729-201ENSMUST00000206759 2052 ntBASIC20.14■□□□□ 0.82
Nid2O88322 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Nid2O88322 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Nid2O88322 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Nid2O88322 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Nid2O88322 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nid2O88322 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Nid2O88322 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nid2O88322 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC20.14■□□□□ 0.81
Nid2O88322 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Nid2O88322 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Nid2O88322 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC20.14■□□□□ 0.81
Nid2O88322 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nid2O88322 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nid2O88322 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nid2O88322 Gm28265-201ENSMUST00000188201 2319 ntBASIC20.14■□□□□ 0.81
Nid2O88322 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nid2O88322 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nid2O88322 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nid2O88322 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Nid2O88322 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nid2O88322 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nid2O88322 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC20.13■□□□□ 0.81
Nid2O88322 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nid2O88322 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC20.13■□□□□ 0.81
Nid2O88322 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC20.13■□□□□ 0.81
Nid2O88322 Gm15483-201ENSMUST00000120338 456 ntBASIC20.13■□□□□ 0.81
Nid2O88322 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Nid2O88322 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC20.13■□□□□ 0.81
Nid2O88322 Gm8116-201ENSMUST00000182917 1201 ntBASIC20.13■□□□□ 0.81
Nid2O88322 Gm38225-201ENSMUST00000194001 393 ntBASIC20.13■□□□□ 0.81
Nid2O88322 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nid2O88322 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nid2O88322 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Nid2O88322 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nid2O88322 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Nid2O88322 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nid2O88322 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Nid2O88322 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC20.13■□□□□ 0.81
Nid2O88322 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nid2O88322 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC20.12■□□□□ 0.81
Nid2O88322 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC20.12■□□□□ 0.81
Nid2O88322 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC20.12■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms