Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC14.01□□□□□ -0.17
Col5a1O88207 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col5a1O88207 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col5a1O88207 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col5a1O88207 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col5a1O88207 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Col5a1O88207 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14□□□□□ -0.17
Col5a1O88207 Gm42934-201ENSMUST00000196920 1345 ntBASIC14□□□□□ -0.17
Col5a1O88207 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col5a1O88207 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col5a1O88207 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col5a1O88207 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Col5a1O88207 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
Col5a1O88207 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Col5a1O88207 Gm11453-201ENSMUST00000117318 1007 ntBASIC14□□□□□ -0.17
Col5a1O88207 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC14□□□□□ -0.17
Col5a1O88207 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Col5a1O88207 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col5a1O88207 Gpr146-202ENSMUST00000053120 1040 ntBASIC14□□□□□ -0.17
Col5a1O88207 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col5a1O88207 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Col5a1O88207 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col5a1O88207 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Col5a1O88207 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
Col5a1O88207 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col5a1O88207 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Col5a1O88207 Nudt18-203ENSMUST00000228768 1578 ntBASIC14□□□□□ -0.17
Col5a1O88207 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col5a1O88207 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col5a1O88207 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col5a1O88207 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col5a1O88207 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col5a1O88207 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col5a1O88207 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14□□□□□ -0.17
Col5a1O88207 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Col5a1O88207 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col5a1O88207 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Col5a1O88207 Gm7669-201ENSMUST00000210184 1603 ntBASIC13.99□□□□□ -0.17
Col5a1O88207 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col5a1O88207 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col5a1O88207 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC13.99□□□□□ -0.17
Col5a1O88207 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC13.99□□□□□ -0.17
Col5a1O88207 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col5a1O88207 Rpph1-201ENSMUST00000175096 319 ntBASIC13.99□□□□□ -0.17
Col5a1O88207 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col5a1O88207 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col5a1O88207 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col5a1O88207 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col5a1O88207 AC126250.1-201ENSMUST00000228343 1768 ntBASIC13.99□□□□□ -0.17
Col5a1O88207 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Col5a1O88207 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col5a1O88207 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col5a1O88207 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Col5a1O88207 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col5a1O88207 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col5a1O88207 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC13.99□□□□□ -0.17
Col5a1O88207 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.99□□□□□ -0.17
Col5a1O88207 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col5a1O88207 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col5a1O88207 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col5a1O88207 AC153526.5-201ENSMUST00000218661 2147 ntBASIC13.98□□□□□ -0.17
Col5a1O88207 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Col5a1O88207 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col5a1O88207 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col5a1O88207 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Col5a1O88207 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col5a1O88207 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col5a1O88207 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Col5a1O88207 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Col5a1O88207 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC13.98□□□□□ -0.17
Col5a1O88207 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col5a1O88207 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col5a1O88207 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Col5a1O88207 Gm29361-201ENSMUST00000183323 2000 ntBASIC13.98□□□□□ -0.17
Col5a1O88207 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col5a1O88207 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col5a1O88207 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC13.98□□□□□ -0.17
Col5a1O88207 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC13.98□□□□□ -0.17
Col5a1O88207 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Col5a1O88207 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col5a1O88207 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col5a1O88207 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
Col5a1O88207 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC13.97□□□□□ -0.17
Col5a1O88207 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Col5a1O88207 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Col5a1O88207 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col5a1O88207 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col5a1O88207 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col5a1O88207 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC13.97□□□□□ -0.17
Col5a1O88207 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC13.97□□□□□ -0.17
Col5a1O88207 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col5a1O88207 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col5a1O88207 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col5a1O88207 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC13.97□□□□□ -0.17
Col5a1O88207 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col5a1O88207 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col5a1O88207 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col5a1O88207 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col5a1O88207 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC13.97□□□□□ -0.17
Col5a1O88207 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms