Protein–RNA interactions for Protein: O70228

Atp9a, Probable phospholipid-transporting ATPase IIA, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp9aO70228 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC17.31■□□□□ 0.36
Atp9aO70228 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Atp9aO70228 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC17.31■□□□□ 0.36
Atp9aO70228 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Atp9aO70228 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atp9aO70228 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Atp9aO70228 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atp9aO70228 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Atp9aO70228 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atp9aO70228 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atp9aO70228 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atp9aO70228 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Atp9aO70228 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atp9aO70228 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atp9aO70228 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atp9aO70228 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atp9aO70228 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atp9aO70228 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Atp9aO70228 Gm7669-201ENSMUST00000210184 1603 ntBASIC17.3■□□□□ 0.36
Atp9aO70228 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC17.3■□□□□ 0.36
Atp9aO70228 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC17.3■□□□□ 0.36
Atp9aO70228 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC17.3■□□□□ 0.36
Atp9aO70228 AC151836.1-202ENSMUST00000226259 753 ntBASIC17.3■□□□□ 0.36
Atp9aO70228 Gm10175-201ENSMUST00000086013 645 ntBASIC17.3■□□□□ 0.36
Atp9aO70228 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atp9aO70228 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atp9aO70228 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atp9aO70228 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atp9aO70228 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Atp9aO70228 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atp9aO70228 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atp9aO70228 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Atp9aO70228 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atp9aO70228 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atp9aO70228 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atp9aO70228 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC17.29■□□□□ 0.36
Atp9aO70228 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atp9aO70228 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atp9aO70228 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Atp9aO70228 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.29■□□□□ 0.36
Atp9aO70228 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Atp9aO70228 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC17.29■□□□□ 0.36
Atp9aO70228 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Atp9aO70228 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC17.29■□□□□ 0.36
Atp9aO70228 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC17.29■□□□□ 0.36
Atp9aO70228 Gm44945-201ENSMUST00000206764 1187 ntBASIC17.29■□□□□ 0.36
Atp9aO70228 CT943659.1-201ENSMUST00000215459 326 ntBASIC17.29■□□□□ 0.36
Atp9aO70228 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Atp9aO70228 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atp9aO70228 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atp9aO70228 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atp9aO70228 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC17.29■□□□□ 0.36
Atp9aO70228 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atp9aO70228 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atp9aO70228 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC17.29■□□□□ 0.36
Atp9aO70228 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Atp9aO70228 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Atp9aO70228 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Atp9aO70228 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Atp9aO70228 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Atp9aO70228 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Atp9aO70228 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Atp9aO70228 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Atp9aO70228 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Atp9aO70228 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Atp9aO70228 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Atp9aO70228 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Atp9aO70228 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Atp9aO70228 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC17.28■□□□□ 0.36
Atp9aO70228 Gm25911-201ENSMUST00000157621 56 ntBASIC17.28■□□□□ 0.36
Atp9aO70228 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Atp9aO70228 Gm7229-201ENSMUST00000214719 1007 ntBASIC17.28■□□□□ 0.36
Atp9aO70228 AC153526.5-201ENSMUST00000218661 2147 ntBASIC17.28■□□□□ 0.36
Atp9aO70228 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Atp9aO70228 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.28■□□□□ 0.36
Atp9aO70228 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Atp9aO70228 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Atp9aO70228 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC17.28■□□□□ 0.36
Atp9aO70228 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Atp9aO70228 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Atp9aO70228 Gm19430-201ENSMUST00000193847 2137 ntBASIC17.27■□□□□ 0.36
Atp9aO70228 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Atp9aO70228 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Atp9aO70228 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Atp9aO70228 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Atp9aO70228 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Atp9aO70228 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Atp9aO70228 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Atp9aO70228 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Atp9aO70228 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Atp9aO70228 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
Atp9aO70228 Gm13597-201ENSMUST00000121239 375 ntBASIC17.27■□□□□ 0.36
Atp9aO70228 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Atp9aO70228 Gm7286-201ENSMUST00000182691 1007 ntBASIC17.27■□□□□ 0.36
Atp9aO70228 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC17.27■□□□□ 0.36
Atp9aO70228 Gm45683-201ENSMUST00000210825 1247 ntBASIC17.27■□□□□ 0.36
Atp9aO70228 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Atp9aO70228 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Atp9aO70228 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC17.27■□□□□ 0.36
Atp9aO70228 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms