Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Trdmt1O55055 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trdmt1O55055 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trdmt1O55055 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trdmt1O55055 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Trdmt1O55055 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trdmt1O55055 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Trdmt1O55055 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trdmt1O55055 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trdmt1O55055 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Trdmt1O55055 AC126250.1-201ENSMUST00000228343 1768 ntBASIC17.15■□□□□ 0.34
Trdmt1O55055 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Trdmt1O55055 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trdmt1O55055 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trdmt1O55055 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC17.14■□□□□ 0.33
Trdmt1O55055 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.14■□□□□ 0.33
Trdmt1O55055 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trdmt1O55055 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trdmt1O55055 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trdmt1O55055 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trdmt1O55055 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Trdmt1O55055 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Trdmt1O55055 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC17.14■□□□□ 0.33
Trdmt1O55055 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC17.14■□□□□ 0.33
Trdmt1O55055 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trdmt1O55055 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC17.14■□□□□ 0.33
Trdmt1O55055 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trdmt1O55055 AC025913.2-201ENSMUST00000220136 1766 ntBASIC17.14■□□□□ 0.33
Trdmt1O55055 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trdmt1O55055 Fgf17-202ENSMUST00000227123 1336 ntBASIC17.14■□□□□ 0.33
Trdmt1O55055 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC17.14■□□□□ 0.33
Trdmt1O55055 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trdmt1O55055 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trdmt1O55055 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trdmt1O55055 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Trdmt1O55055 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trdmt1O55055 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC17.14■□□□□ 0.33
Trdmt1O55055 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trdmt1O55055 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trdmt1O55055 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trdmt1O55055 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
Trdmt1O55055 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC17.13■□□□□ 0.33
Trdmt1O55055 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trdmt1O55055 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Trdmt1O55055 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trdmt1O55055 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trdmt1O55055 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trdmt1O55055 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trdmt1O55055 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trdmt1O55055 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trdmt1O55055 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC17.13■□□□□ 0.33
Trdmt1O55055 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trdmt1O55055 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trdmt1O55055 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
Trdmt1O55055 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trdmt1O55055 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC17.13■□□□□ 0.33
Trdmt1O55055 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC17.13■□□□□ 0.33
Trdmt1O55055 Gm10499-201ENSMUST00000174094 934 ntBASIC17.13■□□□□ 0.33
Trdmt1O55055 Gm25948-201ENSMUST00000175334 112 ntBASIC17.13■□□□□ 0.33
Trdmt1O55055 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trdmt1O55055 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trdmt1O55055 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trdmt1O55055 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trdmt1O55055 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trdmt1O55055 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trdmt1O55055 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trdmt1O55055 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trdmt1O55055 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trdmt1O55055 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trdmt1O55055 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Trdmt1O55055 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trdmt1O55055 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
Trdmt1O55055 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trdmt1O55055 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trdmt1O55055 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trdmt1O55055 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trdmt1O55055 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trdmt1O55055 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trdmt1O55055 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trdmt1O55055 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
Trdmt1O55055 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Trdmt1O55055 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Trdmt1O55055 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trdmt1O55055 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Trdmt1O55055 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC17.12■□□□□ 0.33
Trdmt1O55055 Nudt18-203ENSMUST00000228768 1578 ntBASIC17.12■□□□□ 0.33
Trdmt1O55055 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trdmt1O55055 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trdmt1O55055 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Trdmt1O55055 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Trdmt1O55055 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trdmt1O55055 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trdmt1O55055 AC130669.1-201ENSMUST00000228537 1672 ntBASIC17.12■□□□□ 0.33
Trdmt1O55055 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trdmt1O55055 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Trdmt1O55055 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trdmt1O55055 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trdmt1O55055 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trdmt1O55055 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trdmt1O55055 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms