Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Limk2O54785 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Limk2O54785 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Limk2O54785 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
Limk2O54785 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Limk2O54785 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Limk2O54785 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC15.84■□□□□ 0.13
Limk2O54785 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Limk2O54785 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC15.84■□□□□ 0.13
Limk2O54785 AC159093.1-201ENSMUST00000227779 380 ntBASIC15.84■□□□□ 0.13
Limk2O54785 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Limk2O54785 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC15.84■□□□□ 0.13
Limk2O54785 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Limk2O54785 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Limk2O54785 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC15.84■□□□□ 0.13
Limk2O54785 AC133083.1-201ENSMUST00000221736 2209 ntBASIC15.84■□□□□ 0.13
Limk2O54785 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Limk2O54785 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Limk2O54785 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Limk2O54785 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC15.84■□□□□ 0.13
Limk2O54785 AC163637.1-201ENSMUST00000215491 1894 ntBASIC15.84■□□□□ 0.13
Limk2O54785 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC15.84■□□□□ 0.13
Limk2O54785 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC15.84■□□□□ 0.13
Limk2O54785 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Limk2O54785 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Limk2O54785 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Limk2O54785 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC15.83■□□□□ 0.13
Limk2O54785 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Limk2O54785 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
Limk2O54785 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC15.83■□□□□ 0.13
Limk2O54785 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Limk2O54785 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Limk2O54785 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Limk2O54785 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Limk2O54785 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Limk2O54785 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Limk2O54785 Gm25990-201ENSMUST00000102440 86 ntBASIC15.83■□□□□ 0.12
Limk2O54785 Gm11779-201ENSMUST00000118541 368 ntBASIC15.83■□□□□ 0.12
Limk2O54785 Gm8344-201ENSMUST00000119813 856 ntBASIC15.83■□□□□ 0.12
Limk2O54785 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC15.83■□□□□ 0.12
Limk2O54785 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Limk2O54785 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Limk2O54785 Gm7230-201ENSMUST00000173026 815 ntBASIC15.83■□□□□ 0.12
Limk2O54785 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Limk2O54785 Gm4535-201ENSMUST00000182274 558 ntBASIC15.83■□□□□ 0.12
Limk2O54785 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Limk2O54785 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Limk2O54785 Gm10355-201ENSMUST00000097146 517 ntBASIC15.83■□□□□ 0.12
Limk2O54785 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Limk2O54785 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Limk2O54785 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Limk2O54785 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Limk2O54785 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Limk2O54785 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Limk2O54785 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Limk2O54785 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC15.83■□□□□ 0.12
Limk2O54785 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Limk2O54785 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Limk2O54785 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC15.83■□□□□ 0.12
Limk2O54785 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
Limk2O54785 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Limk2O54785 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Limk2O54785 Gm44616-201ENSMUST00000206417 1732 ntBASIC15.82■□□□□ 0.12
Limk2O54785 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Limk2O54785 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Limk2O54785 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Limk2O54785 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Limk2O54785 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Limk2O54785 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Limk2O54785 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Limk2O54785 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Limk2O54785 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Limk2O54785 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
Limk2O54785 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC15.82■□□□□ 0.12
Limk2O54785 Gm19164-201ENSMUST00000210667 640 ntBASIC15.82■□□□□ 0.12
Limk2O54785 Psmb5-202ENSMUST00000227257 622 ntBASIC15.82■□□□□ 0.12
Limk2O54785 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Limk2O54785 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Limk2O54785 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Limk2O54785 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Limk2O54785 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Limk2O54785 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC15.82■□□□□ 0.12
Limk2O54785 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Limk2O54785 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Limk2O54785 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Limk2O54785 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Limk2O54785 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Limk2O54785 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Limk2O54785 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Limk2O54785 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC15.82■□□□□ 0.12
Limk2O54785 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Limk2O54785 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Limk2O54785 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Limk2O54785 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Limk2O54785 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Limk2O54785 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Limk2O54785 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Limk2O54785 Gm13418-201ENSMUST00000119097 944 ntBASIC15.81■□□□□ 0.12
Limk2O54785 Gm15467-201ENSMUST00000120582 445 ntBASIC15.81■□□□□ 0.12
Limk2O54785 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms