Protein–RNA interactions for Protein: O35900

Lsm2, U6 snRNA-associated Sm-like protein LSm2, mousemouse

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm2O35900 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lsm2O35900 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lsm2O35900 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lsm2O35900 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lsm2O35900 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lsm2O35900 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lsm2O35900 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC13.94□□□□□ -0.18
Lsm2O35900 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Lsm2O35900 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lsm2O35900 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC13.94□□□□□ -0.18
Lsm2O35900 Gm43697-201ENSMUST00000199637 2581 ntBASIC13.94□□□□□ -0.18
Lsm2O35900 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lsm2O35900 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Lsm2O35900 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
Lsm2O35900 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Lsm2O35900 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC13.94□□□□□ -0.18
Lsm2O35900 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Lsm2O35900 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Lsm2O35900 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lsm2O35900 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
Lsm2O35900 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lsm2O35900 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lsm2O35900 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lsm2O35900 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Lsm2O35900 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lsm2O35900 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Lsm2O35900 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Lsm2O35900 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Lsm2O35900 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lsm2O35900 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lsm2O35900 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC13.94□□□□□ -0.18
Lsm2O35900 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lsm2O35900 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Lsm2O35900 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lsm2O35900 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lsm2O35900 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lsm2O35900 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Lsm2O35900 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lsm2O35900 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lsm2O35900 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Lsm2O35900 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lsm2O35900 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lsm2O35900 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lsm2O35900 Gm5049-201ENSMUST00000195878 1590 ntBASIC13.93□□□□□ -0.18
Lsm2O35900 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lsm2O35900 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lsm2O35900 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lsm2O35900 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lsm2O35900 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC13.93□□□□□ -0.18
Lsm2O35900 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Lsm2O35900 Gm16061-201ENSMUST00000122167 857 ntBASIC13.93□□□□□ -0.18
Lsm2O35900 Gm13474-201ENSMUST00000122466 815 ntBASIC13.93□□□□□ -0.18
Lsm2O35900 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lsm2O35900 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Lsm2O35900 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Lsm2O35900 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lsm2O35900 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lsm2O35900 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lsm2O35900 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lsm2O35900 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lsm2O35900 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lsm2O35900 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Lsm2O35900 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lsm2O35900 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lsm2O35900 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Lsm2O35900 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Lsm2O35900 AC167013.2-201ENSMUST00000228520 2684 ntBASIC13.93□□□□□ -0.18
Lsm2O35900 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lsm2O35900 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Lsm2O35900 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lsm2O35900 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Lsm2O35900 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lsm2O35900 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lsm2O35900 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lsm2O35900 Fbxl12-205ENSMUST00000140702 1555 ntBASIC13.92□□□□□ -0.18
Lsm2O35900 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Lsm2O35900 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Lsm2O35900 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lsm2O35900 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lsm2O35900 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lsm2O35900 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lsm2O35900 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Lsm2O35900 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
Lsm2O35900 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lsm2O35900 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lsm2O35900 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lsm2O35900 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC13.92□□□□□ -0.18
Lsm2O35900 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lsm2O35900 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC13.92□□□□□ -0.18
Lsm2O35900 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC13.92□□□□□ -0.18
Lsm2O35900 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC13.92□□□□□ -0.18
Lsm2O35900 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lsm2O35900 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lsm2O35900 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Lsm2O35900 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lsm2O35900 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lsm2O35900 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lsm2O35900 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Lsm2O35900 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.92□□□□□ -0.18
Lsm2O35900 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms