Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC15.26■□□□□ 0.03
Npc1O35604 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC15.26■□□□□ 0.03
Npc1O35604 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC15.26■□□□□ 0.03
Npc1O35604 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC15.26■□□□□ 0.03
Npc1O35604 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Npc1O35604 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Npc1O35604 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Npc1O35604 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Npc1O35604 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Npc1O35604 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Npc1O35604 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Npc1O35604 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Npc1O35604 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Npc1O35604 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Npc1O35604 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC15.25■□□□□ 0.03
Npc1O35604 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Npc1O35604 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Npc1O35604 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Npc1O35604 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Npc1O35604 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Npc1O35604 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Npc1O35604 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Npc1O35604 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Npc1O35604 Gm25990-201ENSMUST00000102440 86 ntBASIC15.25■□□□□ 0.03
Npc1O35604 Gm4609-201ENSMUST00000106443 1002 ntBASIC15.25■□□□□ 0.03
Npc1O35604 Gm5138-201ENSMUST00000113842 1002 ntBASIC15.25■□□□□ 0.03
Npc1O35604 Gm15191-201ENSMUST00000117933 1000 ntBASIC15.25■□□□□ 0.03
Npc1O35604 Gm12182-201ENSMUST00000118655 1008 ntBASIC15.25■□□□□ 0.03
Npc1O35604 Gm13882-201ENSMUST00000120886 1002 ntBASIC15.25■□□□□ 0.03
Npc1O35604 Gm10284-201ENSMUST00000145057 1005 ntBASIC15.25■□□□□ 0.03
Npc1O35604 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC15.25■□□□□ 0.03
Npc1O35604 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC15.25■□□□□ 0.03
Npc1O35604 Gm10481-201ENSMUST00000179228 1002 ntBASIC15.25■□□□□ 0.03
Npc1O35604 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC15.25■□□□□ 0.03
Npc1O35604 Gm2574-201ENSMUST00000181051 1002 ntBASIC15.25■□□□□ 0.03
Npc1O35604 Gm3200-201ENSMUST00000181493 1002 ntBASIC15.25■□□□□ 0.03
Npc1O35604 Gm8825-201ENSMUST00000182565 998 ntBASIC15.25■□□□□ 0.03
Npc1O35604 Gm4518-201ENSMUST00000182638 718 ntBASIC15.25■□□□□ 0.03
Npc1O35604 Gm8330-201ENSMUST00000182754 1008 ntBASIC15.25■□□□□ 0.03
Npc1O35604 Gm4575-201ENSMUST00000182991 1002 ntBASIC15.25■□□□□ 0.03
Npc1O35604 Gm8709-201ENSMUST00000183230 1012 ntBASIC15.25■□□□□ 0.03
Npc1O35604 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Npc1O35604 Gm44771-201ENSMUST00000206975 626 ntBASIC15.25■□□□□ 0.03
Npc1O35604 Gm10060-201ENSMUST00000212002 111 ntBASIC15.25■□□□□ 0.03
Npc1O35604 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Npc1O35604 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Npc1O35604 Gm10293-201ENSMUST00000076317 1002 ntBASIC15.25■□□□□ 0.03
Npc1O35604 Gm6316-201ENSMUST00000082064 1020 ntBASIC15.25■□□□□ 0.03
Npc1O35604 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Npc1O35604 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Npc1O35604 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Npc1O35604 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Npc1O35604 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Npc1O35604 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Npc1O35604 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Npc1O35604 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Npc1O35604 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Npc1O35604 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Npc1O35604 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Npc1O35604 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Npc1O35604 Gm9867-201ENSMUST00000192212 2647 ntBASIC15.24■□□□□ 0.03
Npc1O35604 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Npc1O35604 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Npc1O35604 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
Npc1O35604 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Npc1O35604 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Npc1O35604 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Npc1O35604 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Npc1O35604 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC15.24■□□□□ 0.03
Npc1O35604 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC15.24■□□□□ 0.03
Npc1O35604 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Npc1O35604 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC15.24■□□□□ 0.03
Npc1O35604 Gm37584-201ENSMUST00000193595 1290 ntBASIC15.24■□□□□ 0.03
Npc1O35604 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Npc1O35604 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC15.24■□□□□ 0.03
Npc1O35604 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC15.24■□□□□ 0.03
Npc1O35604 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Npc1O35604 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC15.24■□□□□ 0.03
Npc1O35604 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Npc1O35604 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Npc1O35604 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC15.24■□□□□ 0.03
Npc1O35604 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Npc1O35604 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Npc1O35604 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Npc1O35604 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Npc1O35604 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Npc1O35604 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Npc1O35604 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
Npc1O35604 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Npc1O35604 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Npc1O35604 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Npc1O35604 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Npc1O35604 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Npc1O35604 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Npc1O35604 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Npc1O35604 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Npc1O35604 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Npc1O35604 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Npc1O35604 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC15.23■□□□□ 0.03
Npc1O35604 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms