Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Tnfsf11O35235 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC12.23□□□□□ -0.45
Tnfsf11O35235 AC175538.1-201ENSMUST00000225343 1269 ntBASIC12.23□□□□□ -0.45
Tnfsf11O35235 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tnfsf11O35235 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tnfsf11O35235 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Tnfsf11O35235 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tnfsf11O35235 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tnfsf11O35235 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tnfsf11O35235 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Tnfsf11O35235 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tnfsf11O35235 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tnfsf11O35235 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Tnfsf11O35235 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tnfsf11O35235 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tnfsf11O35235 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tnfsf11O35235 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC12.23□□□□□ -0.45
Tnfsf11O35235 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Tnfsf11O35235 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC12.23□□□□□ -0.45
Tnfsf11O35235 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tnfsf11O35235 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Tnfsf11O35235 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfsf11O35235 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfsf11O35235 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfsf11O35235 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Tnfsf11O35235 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC12.22□□□□□ -0.45
Tnfsf11O35235 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfsf11O35235 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfsf11O35235 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Tnfsf11O35235 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfsf11O35235 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfsf11O35235 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfsf11O35235 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfsf11O35235 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfsf11O35235 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfsf11O35235 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfsf11O35235 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfsf11O35235 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC12.22□□□□□ -0.45
Tnfsf11O35235 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfsf11O35235 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfsf11O35235 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC12.22□□□□□ -0.45
Tnfsf11O35235 Timm23-208ENSMUST00000226683 750 ntBASIC12.22□□□□□ -0.45
Tnfsf11O35235 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfsf11O35235 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfsf11O35235 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Tnfsf11O35235 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Tnfsf11O35235 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfsf11O35235 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Tnfsf11O35235 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Tnfsf11O35235 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfsf11O35235 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Tnfsf11O35235 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfsf11O35235 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Tnfsf11O35235 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfsf11O35235 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfsf11O35235 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfsf11O35235 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfsf11O35235 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfsf11O35235 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfsf11O35235 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfsf11O35235 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Tnfsf11O35235 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Tnfsf11O35235 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Tnfsf11O35235 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Tnfsf11O35235 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Tnfsf11O35235 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Tnfsf11O35235 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC12.21□□□□□ -0.45
Tnfsf11O35235 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Tnfsf11O35235 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Tnfsf11O35235 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Tnfsf11O35235 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Tnfsf11O35235 Gm29257-201ENSMUST00000186115 639 ntBASIC12.21□□□□□ -0.45
Tnfsf11O35235 Gm18421-201ENSMUST00000204122 625 ntBASIC12.21□□□□□ -0.45
Tnfsf11O35235 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Tnfsf11O35235 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Tnfsf11O35235 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Tnfsf11O35235 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Tnfsf11O35235 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.46
Tnfsf11O35235 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Tnfsf11O35235 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Tnfsf11O35235 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Tnfsf11O35235 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Tnfsf11O35235 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Tnfsf11O35235 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Tnfsf11O35235 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC12.2□□□□□ -0.46
Tnfsf11O35235 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfsf11O35235 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfsf11O35235 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfsf11O35235 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfsf11O35235 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Tnfsf11O35235 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC12.2□□□□□ -0.46
Tnfsf11O35235 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfsf11O35235 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfsf11O35235 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfsf11O35235 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfsf11O35235 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC12.2□□□□□ -0.46
Tnfsf11O35235 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Tnfsf11O35235 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
Tnfsf11O35235 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfsf11O35235 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms