Protein–RNA interactions for Protein: O35218

Cpsf2, Cleavage and polyadenylation specificity factor subunit 2, mousemouse

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf2O35218 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cpsf2O35218 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cpsf2O35218 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Cpsf2O35218 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cpsf2O35218 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cpsf2O35218 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cpsf2O35218 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cpsf2O35218 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cpsf2O35218 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cpsf2O35218 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cpsf2O35218 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cpsf2O35218 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cpsf2O35218 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
Cpsf2O35218 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cpsf2O35218 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cpsf2O35218 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Cpsf2O35218 Gm27528-202ENSMUST00000222916 2012 ntBASIC16.75■□□□□ 0.27
Cpsf2O35218 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cpsf2O35218 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cpsf2O35218 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cpsf2O35218 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Cpsf2O35218 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cpsf2O35218 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Cpsf2O35218 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cpsf2O35218 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cpsf2O35218 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cpsf2O35218 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cpsf2O35218 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cpsf2O35218 Gm9013-201ENSMUST00000132939 882 ntBASIC16.75■□□□□ 0.27
Cpsf2O35218 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cpsf2O35218 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cpsf2O35218 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Cpsf2O35218 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cpsf2O35218 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cpsf2O35218 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cpsf2O35218 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cpsf2O35218 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cpsf2O35218 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cpsf2O35218 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cpsf2O35218 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cpsf2O35218 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cpsf2O35218 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cpsf2O35218 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cpsf2O35218 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cpsf2O35218 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cpsf2O35218 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cpsf2O35218 AC114585.2-202ENSMUST00000228094 426 ntBASIC16.74■□□□□ 0.27
Cpsf2O35218 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cpsf2O35218 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cpsf2O35218 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cpsf2O35218 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Cpsf2O35218 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cpsf2O35218 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cpsf2O35218 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cpsf2O35218 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cpsf2O35218 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cpsf2O35218 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cpsf2O35218 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cpsf2O35218 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cpsf2O35218 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cpsf2O35218 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cpsf2O35218 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cpsf2O35218 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cpsf2O35218 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cpsf2O35218 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cpsf2O35218 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cpsf2O35218 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC16.73■□□□□ 0.27
Cpsf2O35218 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cpsf2O35218 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cpsf2O35218 Gm10710-201ENSMUST00000047876 3971 ntBASIC16.73■□□□□ 0.27
Cpsf2O35218 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cpsf2O35218 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cpsf2O35218 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cpsf2O35218 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cpsf2O35218 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cpsf2O35218 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cpsf2O35218 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC16.73■□□□□ 0.27
Cpsf2O35218 Gm5587-201ENSMUST00000206270 674 ntBASIC16.73■□□□□ 0.27
Cpsf2O35218 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC16.73■□□□□ 0.27
Cpsf2O35218 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Cpsf2O35218 AC125350.1-201ENSMUST00000225115 903 ntBASIC16.73■□□□□ 0.27
Cpsf2O35218 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cpsf2O35218 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cpsf2O35218 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC16.73■□□□□ 0.27
Cpsf2O35218 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC16.73■□□□□ 0.27
Cpsf2O35218 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cpsf2O35218 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cpsf2O35218 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cpsf2O35218 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC16.73■□□□□ 0.27
Cpsf2O35218 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cpsf2O35218 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cpsf2O35218 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cpsf2O35218 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cpsf2O35218 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cpsf2O35218 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Cpsf2O35218 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC16.72■□□□□ 0.27
Cpsf2O35218 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cpsf2O35218 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cpsf2O35218 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cpsf2O35218 Gm8258-201ENSMUST00000055593 1449 ntBASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms