Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col15a1O35206 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col15a1O35206 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col15a1O35206 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col15a1O35206 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col15a1O35206 Gm27618-201ENSMUST00000183671 60 ntBASIC19.91■□□□□ 0.78
Col15a1O35206 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC19.91■□□□□ 0.78
Col15a1O35206 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC19.91■□□□□ 0.78
Col15a1O35206 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col15a1O35206 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col15a1O35206 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Col15a1O35206 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col15a1O35206 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col15a1O35206 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col15a1O35206 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col15a1O35206 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col15a1O35206 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
Col15a1O35206 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col15a1O35206 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC19.9■□□□□ 0.78
Col15a1O35206 Gm12428-201ENSMUST00000119844 727 ntBASIC19.9■□□□□ 0.78
Col15a1O35206 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC19.9■□□□□ 0.78
Col15a1O35206 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC19.9■□□□□ 0.78
Col15a1O35206 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Col15a1O35206 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC19.9■□□□□ 0.78
Col15a1O35206 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col15a1O35206 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col15a1O35206 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Col15a1O35206 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col15a1O35206 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col15a1O35206 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
Col15a1O35206 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
Col15a1O35206 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Col15a1O35206 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Col15a1O35206 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Col15a1O35206 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Col15a1O35206 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Col15a1O35206 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Col15a1O35206 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Col15a1O35206 Gm38294-201ENSMUST00000192831 381 ntBASIC19.89■□□□□ 0.77
Col15a1O35206 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Col15a1O35206 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Col15a1O35206 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC19.89■□□□□ 0.77
Col15a1O35206 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Col15a1O35206 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Col15a1O35206 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Col15a1O35206 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Col15a1O35206 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Col15a1O35206 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC19.89■□□□□ 0.77
Col15a1O35206 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Col15a1O35206 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Col15a1O35206 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Col15a1O35206 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Col15a1O35206 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Col15a1O35206 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC19.88■□□□□ 0.77
Col15a1O35206 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Col15a1O35206 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
Col15a1O35206 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Col15a1O35206 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Col15a1O35206 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Col15a1O35206 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Col15a1O35206 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Col15a1O35206 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC19.88■□□□□ 0.77
Col15a1O35206 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC19.88■□□□□ 0.77
Col15a1O35206 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC19.88■□□□□ 0.77
Col15a1O35206 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Col15a1O35206 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Col15a1O35206 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Col15a1O35206 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC19.88■□□□□ 0.77
Col15a1O35206 CT025535.1-201ENSMUST00000227172 491 ntBASIC19.88■□□□□ 0.77
Col15a1O35206 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Col15a1O35206 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
Col15a1O35206 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC19.88■□□□□ 0.77
Col15a1O35206 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Col15a1O35206 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Col15a1O35206 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC19.88■□□□□ 0.77
Col15a1O35206 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Col15a1O35206 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Col15a1O35206 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Col15a1O35206 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Col15a1O35206 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Col15a1O35206 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Col15a1O35206 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Col15a1O35206 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Col15a1O35206 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Col15a1O35206 Gm45293-201ENSMUST00000209754 1812 ntBASIC19.88■□□□□ 0.77
Col15a1O35206 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Col15a1O35206 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Col15a1O35206 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Col15a1O35206 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Col15a1O35206 Gm2810-201ENSMUST00000118681 990 ntBASIC19.87■□□□□ 0.77
Col15a1O35206 Gm16026-204ENSMUST00000162652 683 ntBASIC19.87■□□□□ 0.77
Col15a1O35206 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Col15a1O35206 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC19.87■□□□□ 0.77
Col15a1O35206 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Col15a1O35206 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Col15a1O35206 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Col15a1O35206 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Col15a1O35206 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC19.87■□□□□ 0.77
Col15a1O35206 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Col15a1O35206 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms