Protein–RNA interactions for Protein: O35118

Gfra3, GDNF family receptor alpha-3, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra3O35118 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gfra3O35118 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gfra3O35118 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gfra3O35118 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Gfra3O35118 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gfra3O35118 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gfra3O35118 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Gfra3O35118 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gfra3O35118 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gfra3O35118 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gfra3O35118 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gfra3O35118 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Gfra3O35118 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Gfra3O35118 Gm7222-201ENSMUST00000117512 906 ntBASIC13.51□□□□□ -0.25
Gfra3O35118 Gm8344-201ENSMUST00000119813 856 ntBASIC13.51□□□□□ -0.25
Gfra3O35118 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC13.51□□□□□ -0.25
Gfra3O35118 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC13.51□□□□□ -0.25
Gfra3O35118 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC13.51□□□□□ -0.25
Gfra3O35118 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC13.51□□□□□ -0.25
Gfra3O35118 AC159106.1-201ENSMUST00000224421 690 ntBASIC13.51□□□□□ -0.25
Gfra3O35118 AC132260.2-201ENSMUST00000224482 344 ntBASIC13.51□□□□□ -0.25
Gfra3O35118 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gfra3O35118 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gfra3O35118 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gfra3O35118 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gfra3O35118 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Gfra3O35118 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gfra3O35118 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gfra3O35118 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gfra3O35118 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gfra3O35118 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gfra3O35118 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Gfra3O35118 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC13.5□□□□□ -0.25
Gfra3O35118 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Gfra3O35118 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC13.5□□□□□ -0.25
Gfra3O35118 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC13.5□□□□□ -0.25
Gfra3O35118 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Gfra3O35118 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC13.5□□□□□ -0.25
Gfra3O35118 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gfra3O35118 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gfra3O35118 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC13.5□□□□□ -0.25
Gfra3O35118 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC13.5□□□□□ -0.25
Gfra3O35118 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC13.5□□□□□ -0.25
Gfra3O35118 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC13.5□□□□□ -0.25
Gfra3O35118 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC13.5□□□□□ -0.25
Gfra3O35118 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gfra3O35118 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC13.5□□□□□ -0.25
Gfra3O35118 Gm43514-201ENSMUST00000198852 424 ntBASIC13.5□□□□□ -0.25
Gfra3O35118 Gm18206-201ENSMUST00000207027 926 ntBASIC13.5□□□□□ -0.25
Gfra3O35118 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC13.5□□□□□ -0.25
Gfra3O35118 AV026068-213ENSMUST00000223675 1171 ntBASIC13.5□□□□□ -0.25
Gfra3O35118 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gfra3O35118 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gfra3O35118 Gm15590-201ENSMUST00000078419 552 ntBASIC13.5□□□□□ -0.25
Gfra3O35118 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gfra3O35118 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
Gfra3O35118 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gfra3O35118 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gfra3O35118 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Gfra3O35118 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gfra3O35118 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gfra3O35118 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gfra3O35118 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Gfra3O35118 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Gfra3O35118 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC13.5□□□□□ -0.25
Gfra3O35118 AC154527.4-201ENSMUST00000224364 1667 ntBASIC13.5□□□□□ -0.25
Gfra3O35118 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gfra3O35118 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Gfra3O35118 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Gfra3O35118 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gfra3O35118 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Gfra3O35118 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Gfra3O35118 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Gfra3O35118 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Gfra3O35118 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Gfra3O35118 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Gfra3O35118 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Gfra3O35118 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Gfra3O35118 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Gfra3O35118 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Gfra3O35118 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC13.49□□□□□ -0.25
Gfra3O35118 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Gfra3O35118 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC13.49□□□□□ -0.25
Gfra3O35118 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC13.49□□□□□ -0.25
Gfra3O35118 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Gfra3O35118 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Gfra3O35118 Gm43072-201ENSMUST00000200283 1671 ntBASIC13.49□□□□□ -0.25
Gfra3O35118 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Gfra3O35118 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC13.49□□□□□ -0.25
Gfra3O35118 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Gfra3O35118 Gm37812-201ENSMUST00000195216 2475 ntBASIC13.49□□□□□ -0.25
Gfra3O35118 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Gfra3O35118 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Gfra3O35118 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Gfra3O35118 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Gfra3O35118 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Gfra3O35118 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Gfra3O35118 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Gfra3O35118 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Gfra3O35118 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms