Protein–RNA interactions for Protein: O08788

Dctn1, Dynactin subunit 1, mousemouse

Predictions only

Length 1,281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dctn1O08788 Gm20553-201ENSMUST00000204205 844 ntBASIC19.23■□□□□ 0.67
Dctn1O08788 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Dctn1O08788 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Dctn1O08788 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Dctn1O08788 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Dctn1O08788 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Dctn1O08788 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Dctn1O08788 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC19.23■□□□□ 0.67
Dctn1O08788 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Dctn1O08788 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Dctn1O08788 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Dctn1O08788 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Dctn1O08788 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC19.22■□□□□ 0.67
Dctn1O08788 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Dctn1O08788 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
Dctn1O08788 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
Dctn1O08788 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Dctn1O08788 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC19.22■□□□□ 0.67
Dctn1O08788 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC19.22■□□□□ 0.67
Dctn1O08788 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Dctn1O08788 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Dctn1O08788 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Dctn1O08788 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Dctn1O08788 Nrn1-204ENSMUST00000224323 1779 ntBASIC19.21■□□□□ 0.67
Dctn1O08788 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Dctn1O08788 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Dctn1O08788 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Dctn1O08788 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Dctn1O08788 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Dctn1O08788 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Dctn1O08788 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Dctn1O08788 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Dctn1O08788 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Dctn1O08788 Gm14057-201ENSMUST00000120631 482 ntBASIC19.21■□□□□ 0.67
Dctn1O08788 Gm11745-201ENSMUST00000121669 448 ntBASIC19.21■□□□□ 0.67
Dctn1O08788 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC19.21■□□□□ 0.67
Dctn1O08788 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Dctn1O08788 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Dctn1O08788 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Dctn1O08788 Gm5184-201ENSMUST00000220417 1702 ntBASIC19.21■□□□□ 0.67
Dctn1O08788 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Dctn1O08788 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Dctn1O08788 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Dctn1O08788 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Dctn1O08788 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Dctn1O08788 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Dctn1O08788 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Dctn1O08788 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Dctn1O08788 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Dctn1O08788 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC19.21■□□□□ 0.67
Dctn1O08788 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC19.21■□□□□ 0.67
Dctn1O08788 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Dctn1O08788 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
Dctn1O08788 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Dctn1O08788 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.66
Dctn1O08788 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Dctn1O08788 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
Dctn1O08788 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Dctn1O08788 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Dctn1O08788 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Dctn1O08788 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Dctn1O08788 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC19.2■□□□□ 0.66
Dctn1O08788 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Dctn1O08788 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC19.2■□□□□ 0.66
Dctn1O08788 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Dctn1O08788 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC19.2■□□□□ 0.66
Dctn1O08788 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Dctn1O08788 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Dctn1O08788 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Dctn1O08788 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC19.2■□□□□ 0.66
Dctn1O08788 Gm29361-201ENSMUST00000183323 2000 ntBASIC19.2■□□□□ 0.66
Dctn1O08788 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Dctn1O08788 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Dctn1O08788 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Dctn1O08788 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
Dctn1O08788 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Dctn1O08788 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Dctn1O08788 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Dctn1O08788 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Dctn1O08788 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Dctn1O08788 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Dctn1O08788 Thap2-203ENSMUST00000218989 527 ntBASIC19.19■□□□□ 0.66
Dctn1O08788 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Dctn1O08788 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Dctn1O08788 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Dctn1O08788 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Dctn1O08788 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Dctn1O08788 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Dctn1O08788 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Dctn1O08788 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Dctn1O08788 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC19.18■□□□□ 0.66
Dctn1O08788 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Dctn1O08788 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Dctn1O08788 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Dctn1O08788 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Dctn1O08788 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC19.18■□□□□ 0.66
Dctn1O08788 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC19.18■□□□□ 0.66
Dctn1O08788 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Dctn1O08788 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Dctn1O08788 Gm5312-201ENSMUST00000203728 547 ntBASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms