Protein–RNA interactions for Protein: O08785

Clock, Circadian locomoter output cycles protein kaput, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClockO08785 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
ClockO08785 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
ClockO08785 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ClockO08785 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC14.89□□□□□ -0.03
ClockO08785 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ClockO08785 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
ClockO08785 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
ClockO08785 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ClockO08785 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ClockO08785 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ClockO08785 Gm16042-201ENSMUST00000204813 1247 ntBASIC14.89□□□□□ -0.03
ClockO08785 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC14.89□□□□□ -0.03
ClockO08785 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ClockO08785 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ClockO08785 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
ClockO08785 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC14.89□□□□□ -0.03
ClockO08785 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
ClockO08785 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
ClockO08785 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ClockO08785 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ClockO08785 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
ClockO08785 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ClockO08785 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
ClockO08785 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
ClockO08785 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ClockO08785 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
ClockO08785 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ClockO08785 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ClockO08785 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
ClockO08785 Gm11539-201ENSMUST00000119837 557 ntBASIC14.88□□□□□ -0.03
ClockO08785 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC14.88□□□□□ -0.03
ClockO08785 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ClockO08785 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ClockO08785 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
ClockO08785 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
ClockO08785 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14.88□□□□□ -0.03
ClockO08785 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ClockO08785 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC14.88□□□□□ -0.03
ClockO08785 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ClockO08785 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.88□□□□□ -0.03
ClockO08785 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ClockO08785 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
ClockO08785 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
ClockO08785 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.88□□□□□ -0.03
ClockO08785 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
ClockO08785 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ClockO08785 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
ClockO08785 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ClockO08785 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ClockO08785 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
ClockO08785 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
ClockO08785 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ClockO08785 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.87□□□□□ -0.03
ClockO08785 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.87□□□□□ -0.03
ClockO08785 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ClockO08785 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ClockO08785 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
ClockO08785 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ClockO08785 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ClockO08785 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
ClockO08785 Gm15442-201ENSMUST00000117905 1527 ntBASIC14.87□□□□□ -0.03
ClockO08785 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ClockO08785 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
ClockO08785 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ClockO08785 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ClockO08785 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ClockO08785 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
ClockO08785 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC14.87□□□□□ -0.03
ClockO08785 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
ClockO08785 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
ClockO08785 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ClockO08785 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ClockO08785 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC14.87□□□□□ -0.03
ClockO08785 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ClockO08785 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ClockO08785 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ClockO08785 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ClockO08785 AC156016.1-201ENSMUST00000227190 1035 ntBASIC14.87□□□□□ -0.03
ClockO08785 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ClockO08785 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
ClockO08785 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ClockO08785 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
ClockO08785 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ClockO08785 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
ClockO08785 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ClockO08785 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
ClockO08785 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
ClockO08785 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
ClockO08785 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ClockO08785 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ClockO08785 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
ClockO08785 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC14.86□□□□□ -0.03
ClockO08785 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ClockO08785 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ClockO08785 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ClockO08785 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ClockO08785 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ClockO08785 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.86□□□□□ -0.03
ClockO08785 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
ClockO08785 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms