Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
B020004C17RikJ3QP07 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
B020004C17RikJ3QP07 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.4■□□□□ 0.38
B020004C17RikJ3QP07 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC17.4■□□□□ 0.38
B020004C17RikJ3QP07 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
B020004C17RikJ3QP07 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
B020004C17RikJ3QP07 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
B020004C17RikJ3QP07 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
B020004C17RikJ3QP07 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
B020004C17RikJ3QP07 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
B020004C17RikJ3QP07 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
B020004C17RikJ3QP07 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
B020004C17RikJ3QP07 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC17.4■□□□□ 0.38
B020004C17RikJ3QP07 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
B020004C17RikJ3QP07 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
B020004C17RikJ3QP07 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
B020004C17RikJ3QP07 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
B020004C17RikJ3QP07 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
B020004C17RikJ3QP07 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC17.4■□□□□ 0.38
B020004C17RikJ3QP07 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
B020004C17RikJ3QP07 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
B020004C17RikJ3QP07 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
B020004C17RikJ3QP07 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
B020004C17RikJ3QP07 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
B020004C17RikJ3QP07 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
B020004C17RikJ3QP07 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.39■□□□□ 0.38
B020004C17RikJ3QP07 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
B020004C17RikJ3QP07 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC17.39■□□□□ 0.37
B020004C17RikJ3QP07 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
B020004C17RikJ3QP07 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC17.39■□□□□ 0.37
B020004C17RikJ3QP07 Gm5779-201ENSMUST00000218467 910 ntBASIC17.39■□□□□ 0.37
B020004C17RikJ3QP07 Arhgef33-209ENSMUST00000225223 714 ntBASIC17.39■□□□□ 0.37
B020004C17RikJ3QP07 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
B020004C17RikJ3QP07 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
B020004C17RikJ3QP07 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
B020004C17RikJ3QP07 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
B020004C17RikJ3QP07 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
B020004C17RikJ3QP07 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC17.39■□□□□ 0.37
B020004C17RikJ3QP07 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
B020004C17RikJ3QP07 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
B020004C17RikJ3QP07 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
B020004C17RikJ3QP07 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
B020004C17RikJ3QP07 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
B020004C17RikJ3QP07 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
B020004C17RikJ3QP07 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.38■□□□□ 0.37
B020004C17RikJ3QP07 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
B020004C17RikJ3QP07 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
B020004C17RikJ3QP07 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
B020004C17RikJ3QP07 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
B020004C17RikJ3QP07 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
B020004C17RikJ3QP07 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
B020004C17RikJ3QP07 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC17.38■□□□□ 0.37
B020004C17RikJ3QP07 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
B020004C17RikJ3QP07 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
B020004C17RikJ3QP07 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC17.38■□□□□ 0.37
B020004C17RikJ3QP07 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
B020004C17RikJ3QP07 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC17.38■□□□□ 0.37
B020004C17RikJ3QP07 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC17.38■□□□□ 0.37
B020004C17RikJ3QP07 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
B020004C17RikJ3QP07 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
B020004C17RikJ3QP07 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
B020004C17RikJ3QP07 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC17.38■□□□□ 0.37
B020004C17RikJ3QP07 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
B020004C17RikJ3QP07 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
B020004C17RikJ3QP07 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
B020004C17RikJ3QP07 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC17.38■□□□□ 0.37
B020004C17RikJ3QP07 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
B020004C17RikJ3QP07 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC17.37■□□□□ 0.37
B020004C17RikJ3QP07 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
B020004C17RikJ3QP07 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
B020004C17RikJ3QP07 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
B020004C17RikJ3QP07 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
B020004C17RikJ3QP07 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
B020004C17RikJ3QP07 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
B020004C17RikJ3QP07 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
B020004C17RikJ3QP07 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
B020004C17RikJ3QP07 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
B020004C17RikJ3QP07 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC17.37■□□□□ 0.37
B020004C17RikJ3QP07 Gm2810-201ENSMUST00000118681 990 ntBASIC17.37■□□□□ 0.37
B020004C17RikJ3QP07 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
B020004C17RikJ3QP07 Mir6977-201ENSMUST00000184960 64 ntBASIC17.37■□□□□ 0.37
B020004C17RikJ3QP07 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
B020004C17RikJ3QP07 AC166341.4-201ENSMUST00000220625 123 ntBASIC17.37■□□□□ 0.37
B020004C17RikJ3QP07 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC17.37■□□□□ 0.37
B020004C17RikJ3QP07 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
B020004C17RikJ3QP07 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
B020004C17RikJ3QP07 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC17.37■□□□□ 0.37
B020004C17RikJ3QP07 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
B020004C17RikJ3QP07 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC17.37■□□□□ 0.37
B020004C17RikJ3QP07 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC17.37■□□□□ 0.37
B020004C17RikJ3QP07 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
B020004C17RikJ3QP07 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
B020004C17RikJ3QP07 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
B020004C17RikJ3QP07 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
B020004C17RikJ3QP07 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
B020004C17RikJ3QP07 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
B020004C17RikJ3QP07 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
B020004C17RikJ3QP07 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
B020004C17RikJ3QP07 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
B020004C17RikJ3QP07 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms